| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5607 |
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| Symbol | |
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| ID | 6279415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1808987 |
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| End bp | 1811341 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616684 |
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| Product | hypothetical protein |
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| Protein accession | YP_001889327 |
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| Protein GI | 187920296 |
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| COG category | [S] Function unknown
[V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins
[COG3876] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGCC GGCCACTGCG GGCCATCGTG CATGTGGTGG TGGCAATCGC ACTGCTGCAT
CCGGTGGCCG ACACGCGGGC CGCACCGCCA GACGCTCGAA CACGCGCTGA ATTTGCGCGC
ATCGTCACGG GGCAGATCGA AGCAGGCCGT CTGCCTGGCG CAGTGGTAAT AACGGGTGAC
GCAAACGAAG TTCAATATCG CCAGGCTTTC GGCCGGCGCA TGATCGAGCC GCATCAGGAG
GCGATGACCG TCGACACGGT GTTCGATCTT GCCTCATTGA CCAAAGTAAT CGCGACCACG
ACGGCAATCA TGCAGCTGGT CGACGCGGGG CGCATACAAC TCGATGCGCC CGTCATGCGC
TACTGGCCGG AGTTCGCCGC GCGCGGCAAG CAGGCGGTGA CGGTGCGGCA GTTGCTCGCG
CATACTTCCG GCCTGCAGGC GGATCTGAAA TCGCGGCCTG CCAGCGATGG ACGTGTGGGC
GTGCTGAACG AGATCGCGCA GCAGCGGCTA TACGCAGCGC CTGGTGAGCG TGTGATTTAC
AGCGATCTGA ACTTCGCTGT GCTCGGCGAG CTTGTCGAAC GAATAACGCA TCAGCCGCTT
GATATATATT GCGCCGAGCA CATCTTCGTT CCACTCGGCA TGCGGGACAC CGGCTTCCGT
CCCGACCCGG AACACGCGGC GCGCAGCGCC GCCACCACGG CGGGCCGCCG CGGTAAAGTG
CATGATCCGC TGGCCACGTG GATGCAGGGC GTCGCCGGCA ACGCGGGGCT CTTTTCAACG
GCCGGGGATC TCGCCCGTTT CGCCCAGATG CTGCTCAATG GCGGCCTCAG TACGGCAACG
CCGCCGGTAC GCATTCTCTC TGCGTCGACT ATCGCCACAT TGGCGGTTGC CGCGTCACCG
TTATCGGCCA CGCCCTGGCG CGGTCTTGGC TGGGCGCTGA CGAGTCCGCT AGTGTCGGAC
CGCGACCGGC TACCACCTGT GGGCGCGATT GAACATACCG GCTACACCGG CACCGGAATC
TGGGTGGATT TCATCACGCG CCGTTTCGCC GTGATTCTCA CGAACCGCGT TCACCCAGAC
GACAAAGGCG ACGCGGGGCC ACTGCGCGCG CAGATCATCG CCGTGATGGC CAGTCAGGCG
CCCCCACTCA CACCGGCCGA CATTCGTGCA GTGTTACCCG CCGCCGCACC CGCCATAGCC
GCCGCAAGTC AGTTGCCGAC TGCCACGGGG CCTGTGAAAA GTGGCCTCGA CGTGCTCGAG
GACCGGCAGT TCGCACCCCT GACCGGCCTA CGCATCGGTC TTGTGACTAA CCGTACGGGC
TTCGACGCGA CAGGCAGGCG CACAATCGAC GTGCTCGCTC GCGCACCAGG GGTGACACTC
GCGGCCCTTT TCTCGCCGGA GCACGGCCTG AACTCCGACG TTGACGAACC CATCGGCGAT
TCACTCGATC CGGCGACCGG CCTGGTTGTG CACAGTCTCT ACGGCAGCAT GCGCTCTTTC
CCCGCAGCTT CACTTGAAGG CATCGACGCG CTTGTCTTCG ACATTCAGGA TGCGGGCGTG
CGCTTTTTCA CCTACGAAAC CACACTCGGC TACGCGCTCG AAGCCGCGGC CGCTCGAGGC
ATTCCGCTGT TCGTGCTCGA TCGTCCGAAT CCTCTGGGCG CAGACCGTTT CGGCGGTCCG
GTGCTCGACG AAGGCCATGA ATCCTTCACC GGTTACTTTG CGCTCCCGCT TCAGCCAGGA
CTAACGGTCG GCGAGCTGGC GGCGCTCTTC AATCGCGAGC ACCAAGTCGG CGCCGATCTG
CGCGTCGTCC TCATGATCAA TTATCAGCGC TCGATGCGTT TTGCAGATAC GGGATTAGGT
TGGGTGCCAC TGTCGCCCAA TCTGCGGACA CTCGCGCAAG TTGACCGATA TCCGGAAGTC
GCGATGATCG AAGCCGCCAA TGTCAGCGTA GGCCGCGGCA CGCCCATGCC GTTCGAAGTG
GTCGGCGCGC CATGGATCAA CGCAGCGGAG CTTGCGACCG CACTGAATGC GCTCCACCTG
GGGGCACGTT TCGAAGCCGT CGACTTCGTG CCAACCGAGT CGACGTGGCG CGGCCGCTTA
TGCCACGGTG TGCGGATCGT GCGTGACGCG AACGCTTCGG CAGCGGGCGT CGGACGTCTG
GGTCTCGGTC TGGCCGTAGC ACTGCACGCG CTTTACCCCG GGCGCTTCGA TGTAGACGCC
ACACGCGATG CAATCGGTTC GGGCGCAGTG TGGCAGGCAC TGCGCGATGG GGCAAGCCTC
GATCAGATCG AGCGTATCGC GACGGCTGAG AATAACGCCT TCGCACCGTT GCGGGAAAAG
TATTTGCGCT ATTGA
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| Protein sequence | MRGRPLRAIV HVVVAIALLH PVADTRAAPP DARTRAEFAR IVTGQIEAGR LPGAVVITGD
ANEVQYRQAF GRRMIEPHQE AMTVDTVFDL ASLTKVIATT TAIMQLVDAG RIQLDAPVMR
YWPEFAARGK QAVTVRQLLA HTSGLQADLK SRPASDGRVG VLNEIAQQRL YAAPGERVIY
SDLNFAVLGE LVERITHQPL DIYCAEHIFV PLGMRDTGFR PDPEHAARSA ATTAGRRGKV
HDPLATWMQG VAGNAGLFST AGDLARFAQM LLNGGLSTAT PPVRILSAST IATLAVAASP
LSATPWRGLG WALTSPLVSD RDRLPPVGAI EHTGYTGTGI WVDFITRRFA VILTNRVHPD
DKGDAGPLRA QIIAVMASQA PPLTPADIRA VLPAAAPAIA AASQLPTATG PVKSGLDVLE
DRQFAPLTGL RIGLVTNRTG FDATGRRTID VLARAPGVTL AALFSPEHGL NSDVDEPIGD
SLDPATGLVV HSLYGSMRSF PAASLEGIDA LVFDIQDAGV RFFTYETTLG YALEAAAARG
IPLFVLDRPN PLGADRFGGP VLDEGHESFT GYFALPLQPG LTVGELAALF NREHQVGADL
RVVLMINYQR SMRFADTGLG WVPLSPNLRT LAQVDRYPEV AMIEAANVSV GRGTPMPFEV
VGAPWINAAE LATALNALHL GARFEAVDFV PTESTWRGRL CHGVRIVRDA NASAAGVGRL
GLGLAVALHA LYPGRFDVDA TRDAIGSGAV WQALRDGASL DQIERIATAE NNAFAPLREK
YLRY
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