| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5605 |
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| Symbol | |
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| ID | 6280458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1806661 |
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| End bp | 1807734 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642616682 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001889325 |
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| Protein GI | 187920294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.221698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTCA ATGCCCAGAA AGAGTTGATG CAACTCAAGC CTGCGCGCAA TCAAATTTCA
TCCGACTTCC TGAAAGTCTG CCTGCGGTTG CGCAATCCAG GCGATCCGTA TCCCATGCGC
TTGACGGGGA TCAATTGGCG ATCGGTGTTC GCCTCTATGC TGGGTCGAGC ATGTGAATTT
GATTCAGAGG ACAGCAAAGC GCACCAGCCA TCACAAGGGA GTTTCATGCT GCTCACTTTC
ACCGGCCGCC GCACCTGCTT GCGCAGTCGA TGCATCGGCA TACTGTTGGC CGGCCTATCC
TGGCTGGCAT TCACATTTGG TGTGCACGCG CAGACGCCGC CTCAACGGGT TCCCATACTC
GTCTACCACC GCTTCGCCTC CTCCGTGAAC GATTCCATGA CCGTGCGCGT CTCGACGTTC
AATGCACAGT TGCGATTTCT GCGTGAGCGC GGTTATCAGG TGGTACCGCT GCGGCAAGTC
GTGAGCTGGT TGACCGATCC TTCCACAAAA CTGCCGCCGC GGCCGATTGT CCTGACTGTC
GACGACGGCC ACCAGTCCGT CTTCAACGAG CTTCTGCCGA TTGCGCAGCA GGAGCATCTG
CCAATCACGC TCTTCATCTA CCCTTCTGCG ATTTCGAACG CTTCGTATGC GCTCACGTGG
GATCAGGTGC GCAAGCTTAA GCAGACCGGT CTATTCGACG TCCAGTCGCA CACATACTGG
CATCCCAATT TCAATATCGA ACGGCGCCAT CGCTCGGCCG CCGACTTCCA GCATTTCGTG
CGGTCACAGC TCGACCTGTC GCGGCAGCGC ATCGAAGCGG AGGTCGGCGG CCGGGTCGAC
CTGCTGGCCT GGCCATTCGG CATTTGCGAC GACGAACTGA TGGCTCTGGC TGCCGGAGAG
GGCTATATAG CCGCTTTTTC ACTGGAACCG GGCAGCGTTT ATCGGCACTC GCGCATGCTC
GCGTTGCCGC GCTTCCTGAT GGTCGATTCT TACGGTGTCA CAGGTCTCGC GCATCTGCTC
GGCGAGCCGT CGCCACAGCC CGGATTGAGC TCGGATAGCG GTGGCGACCG ATAA
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| Protein sequence | MALNAQKELM QLKPARNQIS SDFLKVCLRL RNPGDPYPMR LTGINWRSVF ASMLGRACEF
DSEDSKAHQP SQGSFMLLTF TGRRTCLRSR CIGILLAGLS WLAFTFGVHA QTPPQRVPIL
VYHRFASSVN DSMTVRVSTF NAQLRFLRER GYQVVPLRQV VSWLTDPSTK LPPRPIVLTV
DDGHQSVFNE LLPIAQQEHL PITLFIYPSA ISNASYALTW DQVRKLKQTG LFDVQSHTYW
HPNFNIERRH RSAADFQHFV RSQLDLSRQR IEAEVGGRVD LLAWPFGICD DELMALAAGE
GYIAAFSLEP GSVYRHSRML ALPRFLMVDS YGVTGLAHLL GEPSPQPGLS SDSGGDR
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