Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5604 |
Symbol | |
ID | 6278416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1805580 |
End bp | 1806533 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616681 |
Product | UspA domain protein |
Protein accession | YP_001889324 |
Protein GI | 187920293 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.945797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGTC CACACGCCGG CGGCGACGCG AGATGCGCTA TCGGACGAGT CTTCCTCGCC GTCGACAATT CACCGGAATC GGCGCGTGCG GCGGCCTATG TGCGCCACAT GACGCTGCCC GGCGCCCGGA TCCGGATTGC AAGCGTGGCG GAAAACCCTC GCGTGATGCT ACCGCTTACG TCGGCGACGG ATGCCGAGTT GCAGCTTGCG CGCGACGAAC TTGCCCGCGA TGCCGGCGAA GCCGTGGCAC GCGCGAGAGC GCTGTTCGCG GACGCCGGGA TCGAGGTGGA GTCGGGCGTG ATCGAGATCT CGAGGCAAGG CGGCTACACC GCCAATGCGT TGATCGATGC CGCGGCCGAA TGGAAGGCTG ACCTGCTCGT AGTGGGAGCG CGTCAGCATC ACGGCATGCT GCGCTGGATC GAAGGAACCG TCTCGGAATT TGTCACGACT GCGGCGCCGT GTTCGATCCT CGTTGTGCCT GCCAGCTACG AGGCTGAGAT CCAGCTATCG CCGCGCCGGA TGCTGTTCGC GCTGGACGGA AGCGCCGCCT CACTAGATGC TTTGCACTTC GGACTGCAAC TGGCAACGCC GGAGTGCCAC CTCCGCGCGA TCTACGTAAT AGACCGTGGC GCCCGCCTGA CTGATCTCGC GCCGATGCGT GACATCGTGG AAGCCTTTGT GGAAGAAGGG AACGTGGTCC TGGCTGCGGC AGCACGGGTG TTTGCCGACT TGCCCAATGC CTCGGAGACC GCGTTCGTCG AAACAGCAAA ATCGCGCGAC GACGTATCCC ACGCGATCGT CCGTGATGCC CGGCAATGGG GCGCCGACCT CATCGTGGTC GGCACCCACG GGCGACGCGG CGTCGCACGC TGGCTCCTCG GCAGCGTGGC GGCCCGCACC GCGCGCATCG TTCACACGCC GCTGCTGATG GCGCGGCCGG TACCCGAGGC TTGA
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Protein sequence | MNSPHAGGDA RCAIGRVFLA VDNSPESARA AAYVRHMTLP GARIRIASVA ENPRVMLPLT SATDAELQLA RDELARDAGE AVARARALFA DAGIEVESGV IEISRQGGYT ANALIDAAAE WKADLLVVGA RQHHGMLRWI EGTVSEFVTT AAPCSILVVP ASYEAEIQLS PRRMLFALDG SAASLDALHF GLQLATPECH LRAIYVIDRG ARLTDLAPMR DIVEAFVEEG NVVLAAAARV FADLPNASET AFVETAKSRD DVSHAIVRDA RQWGADLIVV GTHGRRGVAR WLLGSVAART ARIVHTPLLM ARPVPEA
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