Gene Bphyt_5604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5604 
Symbol 
ID6278416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1805580 
End bp1806533 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID642616681 
ProductUspA domain protein 
Protein accessionYP_001889324 
Protein GI187920293 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.945797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTC CACACGCCGG CGGCGACGCG AGATGCGCTA TCGGACGAGT CTTCCTCGCC 
GTCGACAATT CACCGGAATC GGCGCGTGCG GCGGCCTATG TGCGCCACAT GACGCTGCCC
GGCGCCCGGA TCCGGATTGC AAGCGTGGCG GAAAACCCTC GCGTGATGCT ACCGCTTACG
TCGGCGACGG ATGCCGAGTT GCAGCTTGCG CGCGACGAAC TTGCCCGCGA TGCCGGCGAA
GCCGTGGCAC GCGCGAGAGC GCTGTTCGCG GACGCCGGGA TCGAGGTGGA GTCGGGCGTG
ATCGAGATCT CGAGGCAAGG CGGCTACACC GCCAATGCGT TGATCGATGC CGCGGCCGAA
TGGAAGGCTG ACCTGCTCGT AGTGGGAGCG CGTCAGCATC ACGGCATGCT GCGCTGGATC
GAAGGAACCG TCTCGGAATT TGTCACGACT GCGGCGCCGT GTTCGATCCT CGTTGTGCCT
GCCAGCTACG AGGCTGAGAT CCAGCTATCG CCGCGCCGGA TGCTGTTCGC GCTGGACGGA
AGCGCCGCCT CACTAGATGC TTTGCACTTC GGACTGCAAC TGGCAACGCC GGAGTGCCAC
CTCCGCGCGA TCTACGTAAT AGACCGTGGC GCCCGCCTGA CTGATCTCGC GCCGATGCGT
GACATCGTGG AAGCCTTTGT GGAAGAAGGG AACGTGGTCC TGGCTGCGGC AGCACGGGTG
TTTGCCGACT TGCCCAATGC CTCGGAGACC GCGTTCGTCG AAACAGCAAA ATCGCGCGAC
GACGTATCCC ACGCGATCGT CCGTGATGCC CGGCAATGGG GCGCCGACCT CATCGTGGTC
GGCACCCACG GGCGACGCGG CGTCGCACGC TGGCTCCTCG GCAGCGTGGC GGCCCGCACC
GCGCGCATCG TTCACACGCC GCTGCTGATG GCGCGGCCGG TACCCGAGGC TTGA
 
Protein sequence
MNSPHAGGDA RCAIGRVFLA VDNSPESARA AAYVRHMTLP GARIRIASVA ENPRVMLPLT 
SATDAELQLA RDELARDAGE AVARARALFA DAGIEVESGV IEISRQGGYT ANALIDAAAE
WKADLLVVGA RQHHGMLRWI EGTVSEFVTT AAPCSILVVP ASYEAEIQLS PRRMLFALDG
SAASLDALHF GLQLATPECH LRAIYVIDRG ARLTDLAPMR DIVEAFVEEG NVVLAAAARV
FADLPNASET AFVETAKSRD DVSHAIVRDA RQWGADLIVV GTHGRRGVAR WLLGSVAART
ARIVHTPLLM ARPVPEA