| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5590 |
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| Symbol | |
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| ID | 6278995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1789117 |
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| End bp | 1790202 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616667 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001889310 |
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| Protein GI | 187920279 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.753958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCA AGCTGATCTT TGTTCTTGCG TTCCTGGGCT TCGTGGCAGG TCTGGTAGCC
GCCTACGTGT ACGGTGTGCA GCAAGCTCCG CAGCCGCCTG TGTTCACACC CGCGTCCAAC
CCCTATGCAC ACGGGCTGTA CGCCGAGGGC ATTGTCGAAA GCGATCAGCC TGCGGGCGTC
AACATCAACA TTTATCCGAA CGTGACCGGC GCCGTGACGG GCATCGCCGC CCGCGAGGGA
CAAGCGGTGA AGGCCGGCGA GGTGCTGCTT ACCATCGACG ATTCGGTGCA ACGCGCTACC
GCGGCACAGC TTGCCGCCCA GGCGGAAGCC GCTGCGGCGA TGCTCGACGA GCTCGAATCG
CAGCCGCGCA AGGAGACGCT CGATGTGGCG AGTGCCCAGG TGGGTGCGGC GGCGGCCGGT
CTCAGGATGG CGCAGGACCA GTTCGACAAA CAGCAGCGCG CCTTCGCCAT CGACCCGAAG
GCGGTCAGCA AGGACACGCT GGACAACGCG GCGAACGCGC TGAAAATGGC GCGAGCCAAT
CTCGACGTGG TGACGCGACA GTACCGGCTC ACTCAGGCAG GCGCATGGAT TTACGACATT
CGCAGCCAGC AGAAGCAGGT CGACGCGCTG CGCAAGGCGG CCGCTTCCGC CGACGCGCTG
GTCGCCCAGT ACACGCTTCG CGCCCCCAGC GACGGTGTGG TGCTGTCGGT CAATGCGGCT
GCTGGATCGT ATGTGTCTCC GCAAGGCGTC TATCAGCCCT ACACGCAGGG GCAAGCGCCC
GTGCTCGTGA TCGGCGCGCC AAACGGTCAA CTGGCCGTGC GCTGCTACGT CGACGAGATC
CTGATCGACC GTCTGCCGGA CCCGCATGCG TTGAAAGCGC GCATGTCCGT GCGCGGCACC
CGGATCGAAG CGCCGCTGGA GTTTGTCCGG ATTCAGCCTT ACGTGAGTCC GAAAGTCGAA
CTGTCCGATC AGCGAGCGGA GCGTGTCGAC GTGCGCGTGC TGCCGGTCAT TTTTCGTGTC
GCGCTGCCCA AAGGCGCGCA CCTTTACCCA GGACAATTAG TCGATGTCTA CATTGCCGCC
GGATAG
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| Protein sequence | MKRKLIFVLA FLGFVAGLVA AYVYGVQQAP QPPVFTPASN PYAHGLYAEG IVESDQPAGV
NINIYPNVTG AVTGIAAREG QAVKAGEVLL TIDDSVQRAT AAQLAAQAEA AAAMLDELES
QPRKETLDVA SAQVGAAAAG LRMAQDQFDK QQRAFAIDPK AVSKDTLDNA ANALKMARAN
LDVVTRQYRL TQAGAWIYDI RSQQKQVDAL RKAAASADAL VAQYTLRAPS DGVVLSVNAA
AGSYVSPQGV YQPYTQGQAP VLVIGAPNGQ LAVRCYVDEI LIDRLPDPHA LKARMSVRGT
RIEAPLEFVR IQPYVSPKVE LSDQRAERVD VRVLPVIFRV ALPKGAHLYP GQLVDVYIAA
G
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