| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5589 |
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| Symbol | |
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| ID | 6279580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1787643 |
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| End bp | 1789139 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642616666 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001889309 |
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| Protein GI | 187920278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAT TGCCGCCGGA TAGCGCACCC CGCGCGCGCA GGGCCGACAC CGTGCGCCGT
CGCGTCGCTC GCGCCTGGGC TCTGTTGCTG GCGCTACTGC TCAACGCCTG CAGCGTGGGC
CCGGATTTCT CCCGGCCGCC GTCGCCGGGA GTCGATCGGT TCGTGCAAGG TGACGCGCTT
CGCACACCGC TGCAGGCAGC AGGCAGCGTG CAAACTTTTT CCGCGCAAAC GAACGTGCCG
TCCGACTGGT GGACGCGTTT TGGCTCGTTG GCGATCGACA GCGCGGTGGA TGAAGCCCTA
ACCGGCAACG CGACAATCGA AGGCGCGCAG GCCGCGCTAC GCCAGAGTGA GGATGAGATG
CGCGCCGGCG CCGGCGTGTT CTACCCGCAG GTCGATGCGG GCTTTGCTGG GTCGCGGCAG
AAATATTCGC CCTCGCGGAT CGGCGCTAAC GAGCCGTCGA CCCTTTTCAA CCTCTTTACG
CTGTCGGCGA GCGTGAGCTA TGCGCTCGAT ATATGGGGCG GCCAGCGCCG CATGGTTGAA
GCGTTGCAGG CGCGTGTCGA TGCTCAGCGT TACACGGTGC TGGCCACCTA TCTCACGCTG
ACCGTCAACG TGGTCAATGC GATGATCGCG CGCGCGGCCT ATCGCGATGA AATTGCAGCG
ACCCGTGAGA TGACCGCTCT GGTGCATGAA CAGATCCGCA TTACGCAAGC GCAGGTCGAG
GCGGGTGCAA GCGCGTATGC CGCTGTGCTG ACGCTGGAAA ACGAACTGGC CACGCTCGAA
GCGTCGCTGC CCGCGCTCGA ACAGAAGCGC GCGCAAGCGG AAGACCTGCT CGCGTCGCTC
TCGGGCATGC TGCCGGTCGA GTGGCACGCG CCGGATCTGT CGTTGGAGGA TATTACGTTG
CCGCATACCT TGCCCGAGAC CGTGCCGGCT TCTCTCGTGC GGCGACGTCC CGACATCCTG
CAGGCGGAGG CGGCACTCCA TGTCGCGAGC GCCAATATCG GCGTCGCCAC CGCCAATTTG
CTGCCCGGTG TGACGCTTTC CGCTTCGGGC GGTTACGACA ACACGTCGAT GAGCGCTTTG
CTTCACCGCT CCGGTCAGAT ATGGACGATC GCGGCCGACG TGAGCGCGCC CGTCTTCCAT
GGCGGCACAC TCTGGTTTCA GCGCCGTGCG GCGCTCAATG CCTACGCACA GACGCGCGCC
TCATACCGGC AAGTGGTGCT CAGTGCTTTT GCACAGGTGG CGGACACGCT GCGGGCGCTC
GAAAACGATG CCCAGGCGCT CGACGCGCAA ACGCGCGCAC GGGACGCTGC CGCCGAAGCA
CTCCGGCTCG TCGAGGCGGA CTATGCGGCC GGTACGGTCG GCTATGTGCA GACATTGATT
GCGGACGGAC TGTTTCATCA GGCGCGCATC GCATGGCTGC AGGGGGTGGC GCAACGGTTG
CAGGATACCG TGGCGCTGTA TGCGGCGTTG GGCGGGGGAT GGGAAAGCAA CCAATGA
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| Protein sequence | MSTLPPDSAP RARRADTVRR RVARAWALLL ALLLNACSVG PDFSRPPSPG VDRFVQGDAL
RTPLQAAGSV QTFSAQTNVP SDWWTRFGSL AIDSAVDEAL TGNATIEGAQ AALRQSEDEM
RAGAGVFYPQ VDAGFAGSRQ KYSPSRIGAN EPSTLFNLFT LSASVSYALD IWGGQRRMVE
ALQARVDAQR YTVLATYLTL TVNVVNAMIA RAAYRDEIAA TREMTALVHE QIRITQAQVE
AGASAYAAVL TLENELATLE ASLPALEQKR AQAEDLLASL SGMLPVEWHA PDLSLEDITL
PHTLPETVPA SLVRRRPDIL QAEAALHVAS ANIGVATANL LPGVTLSASG GYDNTSMSAL
LHRSGQIWTI AADVSAPVFH GGTLWFQRRA ALNAYAQTRA SYRQVVLSAF AQVADTLRAL
ENDAQALDAQ TRARDAAAEA LRLVEADYAA GTVGYVQTLI ADGLFHQARI AWLQGVAQRL
QDTVALYAAL GGGWESNQ
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