Gene Bphyt_5575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5575 
Symbol 
ID6280156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1775902 
End bp1777119 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID642616653 
Productarginine deiminase 
Protein accessionYP_001889296 
Protein GI187920265 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG GCGTCTACTC TGAGATCGGC ACGCTGCGCA CGGTGATGGT CTGCAGGCCT 
GGCCTGGCTC AGGCGCGCCT CACGCCGGCC AATTGCCGCG AACTGCTATT CGATGACGTA
TTGTGGGTCT CGCAAGCGAA GAACGACCAC TACGCCTTCG TCAGCGCGAT GCAGGAGCGC
GGTATCGAGG TGCTGGAAAT GCACGACCTG CTCGCCGATA TCCTGCGAGG ACGGGAAGCG
CGCGACTGGG TGCTTGCACA CAAGCTGTCC GCCGGCGCGG TCGACCTTGA ACTCTCGGCG
CAACTTTTGC CCTGGCTGCG TGAAATGAAC GCCGGCGAAC TCGCCACCCG GTTGCTCGGC
GGAATCGTGC GCGCGGAACT TCCTTTCGAG CCTGCCGGCC TGGTCGCACA ATGTACGGAA
CCCTCTGGAT TTCTGCTGCG GCCGCTGCCC AATACGCTGT TCACCCGTGA TAACAGTTGC
TGGATCAACG ACGGCGTTGC GCTCGGCTCG ATGTACTGGC CCGCCCGCCG CGAGGAAACC
TTGCTTAGCG CGGCTATCTA TCGCTTCCAT CCGCGCTTTA CCGGTGGAGC GCGCATCTGG
TGGGGCGATC CGGAGAGCGA ACACGGCGGC GCCACGCTCG AAGGCGGGGA CGTGATGCCC
TTGTCGCGCG ACGTTGTGCT GGTCGGCATG GGTGAGCGCA CCTCGCCGCA AGGCGTCGCA
CAGCTTGCAC GCACCCTCTT CGCGCATGAA TCGGTCAAGC AGGTGATCGC TGCACAGTTG
CCGCGATCGC GCGGCGCGAT GCATCTCGAC ACGGTGCTCA CATTCTGCGA CCGCGATCTG
GTCACGATCT TTCCCGAGGT GGTCGACGGC ATCCGCTGCA CCTCCCTGCG CCCGTCACAG
ACGCCGGGCA AGCTGGACGT CCGGCCGGAA AGCGCGCCGT TTCTCGAAGT CGTCGCACGG
GCACTCGGCG TGAAACAGCT GCGCACGGTC GCCACCGGCG GCGATACCTG GGAAGCGGAG
CGCGAACAGT GGGACGACGG CAACAACGTG GTGGCGCTCG CGCCGGGCGT CGTCGTTGCG
TACAACCGCA ACGTCTATAC AAACACCTTG TTGCGCAAAG CCGGCGTGGA AGTCATCACG
ATTCCGAGCG GCGAACTGGG CCGCGGACGC GGCGGCGGAC ATTGCATGAC CTGCCCGATC
GAACGCGATC CCGTCTGA
 
Protein sequence
MAFGVYSEIG TLRTVMVCRP GLAQARLTPA NCRELLFDDV LWVSQAKNDH YAFVSAMQER 
GIEVLEMHDL LADILRGREA RDWVLAHKLS AGAVDLELSA QLLPWLREMN AGELATRLLG
GIVRAELPFE PAGLVAQCTE PSGFLLRPLP NTLFTRDNSC WINDGVALGS MYWPARREET
LLSAAIYRFH PRFTGGARIW WGDPESEHGG ATLEGGDVMP LSRDVVLVGM GERTSPQGVA
QLARTLFAHE SVKQVIAAQL PRSRGAMHLD TVLTFCDRDL VTIFPEVVDG IRCTSLRPSQ
TPGKLDVRPE SAPFLEVVAR ALGVKQLRTV ATGGDTWEAE REQWDDGNNV VALAPGVVVA
YNRNVYTNTL LRKAGVEVIT IPSGELGRGR GGGHCMTCPI ERDPV