Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5566 |
Symbol | |
ID | 6277701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1769304 |
End bp | 1770050 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616645 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001889288 |
Protein GI | 187920257 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.431609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCTA AGCGCGTTGC CTTTATCACC GGTGGCATGG GCGGACTGGG GGCTGCCGTC AGCCGGCGTC TTCACGACGC CGGCATGGTA GTCGCCATGT CGCATTCGGA GCGTAACGAT CACGTCGCCA CATGGCTCAT GCATGAACGC GACGCCGGCC GGCGCTTTCA TGCATACGAA GCCGACGTGA CCAGTTTCGA TTCGTGCGCA CATTGCGCGG CACGTGTGCT CGACGAATTC GGCTCGGTCG ACGTACTTGT CAACAATGCC GGCATCGCAC GCGATTCGAC CTTTGCCAAA ATGAGCAAGG ACGACTGGGA TGCGGTTCTG CGCACCGATC TCGACTCGAT GTTCAACATG ACCAAGCCGT TGCTGGGCAG CATGGTTGCC CAACGCTTCG GACGTATCGT CAATATCGCC TCGGTGAACG GTGCGCGCGG CGCCTTCGGG CAGACCAATT ATGCGGCGGC GAAAGCGGGG ATTCATGGCT TCACGATGTC GCTCGCACTG GAAGTTGCGA AACATGGCGT TACGGTGAAC ACCGTCTCGC CCGGTTATCT CGCGACCGCG ATGACCGCGG CCGTGCCGAA AGAGGTGATG GAGACGAAGA TCCTGCCGCA GATTCCAGTA GGTCGCCTTG GGCAACCCGA CGAAGTTGCC GCGCTGGTGG CGTTTCTCTG TTCGGACGAC GCGGCTTTCG TCACCGGCGC GAACTTCGCC ATCAACGGCG GCATGCATAT GGGCTGA
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Protein sequence | MSAKRVAFIT GGMGGLGAAV SRRLHDAGMV VAMSHSERND HVATWLMHER DAGRRFHAYE ADVTSFDSCA HCAARVLDEF GSVDVLVNNA GIARDSTFAK MSKDDWDAVL RTDLDSMFNM TKPLLGSMVA QRFGRIVNIA SVNGARGAFG QTNYAAAKAG IHGFTMSLAL EVAKHGVTVN TVSPGYLATA MTAAVPKEVM ETKILPQIPV GRLGQPDEVA ALVAFLCSDD AAFVTGANFA INGGMHMG
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