Gene Bphyt_5556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5556 
Symbol 
ID6280440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1762637 
End bp1763335 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID642616637 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001889280 
Protein GI187920249 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0415006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTT CACCGCTAGC TACCGCGCCG CTTCTGCACC TCGGCCCACT TGCGATCACC 
GAGCCCGTGC TGGCAACCTG GGCCATCATG GCCGTTGTCA CGGCGGTGTC GGCCTTTCTC
TGCCGCAATC TGTCGCTGAC GGCCGGCAAG GTGCAGACCG CGCTCGAACT GCTGGTCGAG
ACGATCGATC AGCAAATCCG CGACACCATG CAAACCGCTC CGACCACGTA TCGCGCATTG
ATCGGCACGC TATTCCTCTT CGTGCTGATT GCCAACTGGT GCGCGCTGCT GCCGGGCGTG
ACGCCACCCA CCGCGCACCT CGAAACGGAT GCCGCACTCG CGCTGATCGT GCTAGGCGCC
ACGGTGTTCC ACGGTATTCG TACGCGCGGC ATGGCGGGTT ATTTCGCGGC CTTCGCCGAG
CCGAGCTGGG TGATGATTCC CCTGAACCTC GTCGAGCAGA TCACGCGGAC GTTCTCTCTC
GTGGTGCGGC TGTTTGGCAA CGTGATGAGC GGCGTGTTCG TGGTCGGCAT CATCCTGTCA
CTAGCCGGGC TGCTCGTTCC CATTCCGCTA ATGGCTTTGG ACCTGCTGAC GGGCGCCGTG
CAAGCCTACA TTTTTGCCGT GCTGGCGATG GTTTTCATAG GCGCGGCAAT CAACGATACC
CCTCACCACG CTAGCGTAAA AAAAGGCGAA GCCTTATGA
 
Protein sequence
MTASPLATAP LLHLGPLAIT EPVLATWAIM AVVTAVSAFL CRNLSLTAGK VQTALELLVE 
TIDQQIRDTM QTAPTTYRAL IGTLFLFVLI ANWCALLPGV TPPTAHLETD AALALIVLGA
TVFHGIRTRG MAGYFAAFAE PSWVMIPLNL VEQITRTFSL VVRLFGNVMS GVFVVGIILS
LAGLLVPIPL MALDLLTGAV QAYIFAVLAM VFIGAAINDT PHHASVKKGE AL