Gene Bphyt_5550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5550 
Symbol 
ID6278718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1757425 
End bp1757904 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content57% 
IMG OID642616631 
Producthypothetical protein 
Protein accessionYP_001889274 
Protein GI187920243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.927914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.571004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC CCGATCATGT GCAAGATGCA ACCGCCGCGT CCGAACCTGA CCTGTCATGC 
GGAGCGCACC TCGCCACGCG GCGCCAGGGC TACGTGCATC ACGGCATCTA TATCGGAGAC
GGAAAGGTCA TTCATTACGC CGGCTTTTCA CGTCGCTTCA GCCGCGGCCC AGTTGAAATT
GTCTCGATCG ATGAGTTTGT GGCGGGCTTC GGTTTCGAGG TTATATTTCA TCCCTTTGCG
AAATTCAGGG GCGCGGAAGT CGTGCACCGT GCAGCATCAC GCCTTGGCGA ACACAACTAC
CGGCTTCTTA CCAATAACTG CGAGCATTTC TGTGTGTGGT GTCTGTTCGG CCGGGGGAGA
AGCGAGCAGG TACAGGCATG CATCCGTAAC CCGGCGCACG GGATGGTTGT GATCGTCACG
CTCGTCGCCT GCGCTTTGAG CAGTCAATCG CATTTTGTGT CGCCCCTTCC TCTTAACTGA
 
Protein sequence
MSQPDHVQDA TAASEPDLSC GAHLATRRQG YVHHGIYIGD GKVIHYAGFS RRFSRGPVEI 
VSIDEFVAGF GFEVIFHPFA KFRGAEVVHR AASRLGEHNY RLLTNNCEHF CVWCLFGRGR
SEQVQACIRN PAHGMVVIVT LVACALSSQS HFVSPLPLN