| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5544 |
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| Symbol | |
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| ID | 6279656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1750778 |
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| End bp | 1751428 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616626 |
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| Product | transport-associated |
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| Protein accession | YP_001889269 |
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| Protein GI | 187920238 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.078197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.764141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGG ATAGCCAGTT AAAGCAGGAA GTCGAGGACG AACTGATGAG CAGTCCGGCC
GTCGACGCCA ATGGGATAGG TGTTGCCGTT GTCGACGGCA TTGTCACCCT TACCGGCCAC
GTGCCGGACT ATGCGACGAA AGTCGCGGCG GAGAAGTGCG CGAGTCGAAT CGGCGGCGTC
GTCGCGGTGG TGATCGGCCT CGACGTGAAA CTGCGCAAGT CGGAGCAACG CACGGACGAG
GATATCGCCC TAAGCGTGCG CGCGGTTCTC GACTGGATTG CGGGCCTCGA GGAGGATTCG
ATCAGGATCA AGGTGGAGAA GGGCTGGGTG ACGCTGAGCG GCGAGGTCCG GGACGGCTAT
CGCAGCCGCA TTGCGGAGAA AAATATCGTC CACATGCGTG GCGTGACGGG CGTGACGAAC
AGCATCAAGA TCCGCGGTTC GGCTTCGCCG CTCGACATCG AGTCCAACAT TCGCAAAGCA
ATCCAGCGCC ATAGCGATCG TGAGTTGAAG CATGTGGGAG TAGAAGTCGA TGAGGGCCGA
GTGATTCTGT CGGGCCGTCT CAGTTCGACC ATCGAGCGCT CGATCGTGAC GGGGGCCGCG
CGTTCGACGC CTGGCGTGAA AGTGGTGGTA GACCGCCTCG TGGTTGGTTG A
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| Protein sequence | MKPDSQLKQE VEDELMSSPA VDANGIGVAV VDGIVTLTGH VPDYATKVAA EKCASRIGGV
VAVVIGLDVK LRKSEQRTDE DIALSVRAVL DWIAGLEEDS IRIKVEKGWV TLSGEVRDGY
RSRIAEKNIV HMRGVTGVTN SIKIRGSASP LDIESNIRKA IQRHSDRELK HVGVEVDEGR
VILSGRLSST IERSIVTGAA RSTPGVKVVV DRLVVG
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