Gene Bphyt_5529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5529 
Symbol 
ID6277842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1736742 
End bp1737401 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID642616611 
Productphospholipase/Carboxylesterase 
Protein accessionYP_001889254 
Protein GI187920223 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.748493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGG AGCAATTCGA ACACGGCTGG CGGCGCGCGC CGGTGAGCGC GCCTGCCAAA 
GGGCTGGTGG TGCTGATGCA CGGCGTCGGC AGCAATGCGC GCGATCTGAT GCCGCTGGCG
GACATCTGGA GCGAGAGCCT GCCCGACGTG GCCTTCACCT CGCTTGACGG CACCGACGCC
TTCGACGGCG GCTTCGGCGG GCGCCAGTGG TTCAGCCTGC GTGACGTCAA CGAAGGCAAT
CGCGAGGCCC GCGTCGCCGC GGCCTATCCG GCGATGCGGC GCATGCTCGA AACCGAACTC
GCGCACTGGC AGGTGTCGTT CGGGCGCCTC GCGCTGGTCG GATTCTCGCA AGGCTCGATC
ATGGCGATGC ACCACGTGGC GGCCAGCGCG GAAGGCGCGG CCGGTGTGGT CGCGTATTCG
GGGCGGCTCG CCTCGGTGAT CGTCGCGCAA AACGGCACCG CGCTCACGCT GATCCACGGC
GAGGACGACG AGGTGATCCC GGTGCAGGAA CTCGAATCCG CCGCCGACGC TTTCAGCAGC
GCCGGCTATA CCGTCGACGC CTATGCGCTG CCCGGCATCG GCCACACGAT CAACGCCGAC
GGCGTCGCGC TCGGCCAGGA GGCGCTGGAA CACGCGCTGG GCGCTTTGTC GCGCGGCTGA
 
Protein sequence
MAWEQFEHGW RRAPVSAPAK GLVVLMHGVG SNARDLMPLA DIWSESLPDV AFTSLDGTDA 
FDGGFGGRQW FSLRDVNEGN REARVAAAYP AMRRMLETEL AHWQVSFGRL ALVGFSQGSI
MAMHHVAASA EGAAGVVAYS GRLASVIVAQ NGTALTLIHG EDDEVIPVQE LESAADAFSS
AGYTVDAYAL PGIGHTINAD GVALGQEALE HALGALSRG