Gene Bphyt_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5527 
Symbol 
ID6279561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1734393 
End bp1735316 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID642616609 
Productalpha/beta hydrolase fold 
Protein accessionYP_001889252 
Protein GI187920221 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.563792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.509486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCC GACAGCGCCG CGCTCAGGCG CTGCCGGGCT ACCCGCAACT ACTCGTGAAT 
CAATCTGTGC GCGCTGCGTC TTCTTCGGCA TCTTTCATCG AACTGCGAAA CGGTTTGCGC
ATGCCTTACG TGCAAGCCGG CGAAGGTGAG CTGCTGCTGT TCGTGCACGG TTCGTTGTGC
GACTACCGCT ACTGGCAACC GCAACTCGCG GGCCTATCGA AGCACTATCG TTGTGTCGCG
GTGAGTCTTA CGCACTACTG GCCGGCGGCC GATACCGATA CCGAGCCCGG CCTGCCGTTC
AGCTGGAGCG AGCACGCGAA CGAAGTGGCG GAATTCATCG AGCGGTTCGG CGTGGGGCCG
GCGCACGTGG TGGGACATTC GCGCGGCGGT TGCGTGGCGT TTCATTCCGC GCGGCGTCAT
CCTGAACACG TGCGGACGTT GACGCTCGCC GACCCGGGCG GTCCGTTGCA GATTGCCGGA
CGCTCGCCCG CGAGTTTGCC GGAGCCGGTC AATGCGTTGC GCGCGAAAGC GGCGCAACTC
ATCGAAAGCG GGGACGTGGA GGCGGGCCTG CAACTGTTCG TCGACTCGGT GAGCCGGCCC
GGATTCTGGG CAATGAGCAC GCCCGGTTTT CGCAGAATGG CAACCGACAA CGCGCACACG
CTCGCGCGTC AATTCCGCGA TCCGTTGCCC GCCTATGTTC CCGAGCAAGC CGCCGAGGTG
CGCTGCCCGG TTCTGCTGAT CGACGGAGAA AAAAGTCCCG AGATGTTTCA CCGTACCGTG
GCCGCGCTGC AAAACTGGCT GCCGGATGCG CGCCGCGAAA CGGTGCGCGG CGCTTCGCAC
GGGATGAACC TTGCGCATCC GTCGGCGTTC AATCGCTACG TCGACGAATT CATTCGGTCA
GTGAGCGGGC AACAAGCGCA ATGA
 
Protein sequence
MSSRQRRAQA LPGYPQLLVN QSVRAASSSA SFIELRNGLR MPYVQAGEGE LLLFVHGSLC 
DYRYWQPQLA GLSKHYRCVA VSLTHYWPAA DTDTEPGLPF SWSEHANEVA EFIERFGVGP
AHVVGHSRGG CVAFHSARRH PEHVRTLTLA DPGGPLQIAG RSPASLPEPV NALRAKAAQL
IESGDVEAGL QLFVDSVSRP GFWAMSTPGF RRMATDNAHT LARQFRDPLP AYVPEQAAEV
RCPVLLIDGE KSPEMFHRTV AALQNWLPDA RRETVRGASH GMNLAHPSAF NRYVDEFIRS
VSGQQAQ