| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5520 |
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| Symbol | |
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| ID | 6277854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1724939 |
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| End bp | 1726237 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616602 |
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| Product | metabolite/H+ symporter, major facilitator superfamily (MFS) |
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| Protein accession | YP_001889245 |
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| Protein GI | 187920214 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.112643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCT CGCCCTCTAC CCTTACGCCG GCACGTTCAA AGGCTGCGGC GGTTTTCCGC
GTAACGGCCG GAAACTTTCT GGAGCAGTTC GACTTTTTTC TGTTCGGCTT CTATGCGACC
CAGATCGCCA ACGTCTTCTT TCCGGCCGCG AGCGAATTTG CCTCGCTGAT GATGACCTTC
GCGGTCTTCG GCGCCGGTTT TCTGATGCGC CCGCTGGGCG CAATCGTACT CGGCGCTTAC
ATCGACGACG TGGGCCGCCG CAAGGGTCTG ATCGTGACGC TCTCGATCAT GGCGACCGGC
ACCATCCTGA TCGCGTTCGT ACCGGGCTAC GCGACCATTG GCCTTGCGGC GCCCGCGCTG
GTGCTGATCG GGCGGCTCTT GCAGGGCTTT TCCGCGGGTG CGGAGCTGGG CGGCGTCTCG
GTGTACCTGG CCGAGATGGC CACGCCCGGC CGCAAAGGCC TCTTCACGAG CTGGCAGTCC
GCGAGCCAGC AGGTGGCGAT CGTCGTGGCC GCGGCCCTCG GCTTCGCGCT CAACCAGTCG
CTGGACGCCG CCACCATCGC GGCGTGGGGA TGGCGCGTAC CGTTCTTCGT CGGCTGCATG
ATCGTGCCGT TCATCTTCAT GCTGCGTCGC AATCTGCAGG AAACCGAGGA ATTCAAGGCC
CGTCAGCATC GCCCGAACAT GAAGGAGGTC TTGCGCACGC TGGTCGAGAA CTGGACCGTC
GTGATTGCAG GCATGATGCT GGTGGCGATG ACCACCGCGA GCTTCTATCT CATCACGGTC
TACGCACCGA CTTTCGGCAA GACGGTCCTG CACCTGAGCA CCGCCGACAG TTTGCTCGTG
ACCCTATGTG TCGCCGTATC GAACTTCGTG TGGCTGCCGA TCGGCGGAGC CCTCTCCGAC
AGGATCGGTC GCCGGCCGCT GCTCGTCGCC ATGACGCTGC TCGCCATCCT GACCGCATAC
CCGGCATTGT CGTTTCTCGC TCACGCGCCG AGCTTCGTCA ACATGCTGCT CGCACTCCTT
TGGCTCTCGT TCATGTACGG CATCTATAAC GGCGCGATGG TCGTCGCGCT GACGGAAGTG
ATGCCGGCGC AGGTACGCGT CGCGGGCTTC TCGCTCGCCT ATAGCCTCGC GACGGCAGTA
TTCGGCGGTT TCACGCCGGC GATCTCCACA GCACTCATTC ACATGACCGG CGACAAGGCT
GCACCCGGCT ACTGGATGAG CTTCGCCGCG GCGTGCGCCC TTCTTGCGAC ATTCGCCCTG
TATCGCCGCC GTGCAGCGAC GCTAACTCCC GCGCACTAA
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| Protein sequence | MHPSPSTLTP ARSKAAAVFR VTAGNFLEQF DFFLFGFYAT QIANVFFPAA SEFASLMMTF
AVFGAGFLMR PLGAIVLGAY IDDVGRRKGL IVTLSIMATG TILIAFVPGY ATIGLAAPAL
VLIGRLLQGF SAGAELGGVS VYLAEMATPG RKGLFTSWQS ASQQVAIVVA AALGFALNQS
LDAATIAAWG WRVPFFVGCM IVPFIFMLRR NLQETEEFKA RQHRPNMKEV LRTLVENWTV
VIAGMMLVAM TTASFYLITV YAPTFGKTVL HLSTADSLLV TLCVAVSNFV WLPIGGALSD
RIGRRPLLVA MTLLAILTAY PALSFLAHAP SFVNMLLALL WLSFMYGIYN GAMVVALTEV
MPAQVRVAGF SLAYSLATAV FGGFTPAIST ALIHMTGDKA APGYWMSFAA ACALLATFAL
YRRRAATLTP AH
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