Gene Bphyt_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5500 
Symbol 
ID6279956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1703980 
End bp1704633 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID642616583 
ProductDSBA oxidoreductase 
Protein accessionYP_001889226 
Protein GI187920195 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.790496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0537626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA TTCAAGTTGA AATCGCGTAT GACTTCATCT GCCCGTGGTG CTGGATCGGC 
CAGCGCAATC TTGCTGGCGC GCTGGCGGAA TCGGGTGTCG CTGAAGCCGT TTCGATTCGT
TATGTGCCGT TCGAGTTGAA CCCGTTCATG CCGGCCGAAG GCATGGATCG ACGCAGTTAT
CGCACTCGCA AGTTCGGCAG CTGGGCCCGC TCGCAGGCGA TGGACGCGCA GGTCGCCGCC
GCCGGCCTCG CGGCCGGCGT GCAGTTCAAC TACGACCGTG TGCTACGCAC GCCGAACACG
CGTCTTGCGC ATCGCCTGAT GCAGTTTGCC CAGGAGCACA ACGATCCGCG CAAGACGGCG
GCGCTATACC AGGCGATCTA TGCAGCCTAT TTCTCGGAAG GCCGCGACAT CGGTTCACTG
GACACACTCG TGGCGCTCGC GGGAACGCAC GCCCTGGACG AGCAGGCAGC CCGCTCCTTT
CTGCTATCGG AGGCGGGCGA GACCGCTGTG AAAGAGGCTC GCGATCGGGC CGACAGGCTG
GGCGTGCGGG CCGTGCCCAC CACCGTGATC GAAGGCGAGA TGATCAGCGG CGCGCAGCCG
CCGCTCGTCT TCGCACAAGC GTTGCGGGTC GCCTTGCAAG GGAGCGCAGC ATGA
 
Protein sequence
MQNIQVEIAY DFICPWCWIG QRNLAGALAE SGVAEAVSIR YVPFELNPFM PAEGMDRRSY 
RTRKFGSWAR SQAMDAQVAA AGLAAGVQFN YDRVLRTPNT RLAHRLMQFA QEHNDPRKTA
ALYQAIYAAY FSEGRDIGSL DTLVALAGTH ALDEQAARSF LLSEAGETAV KEARDRADRL
GVRAVPTTVI EGEMISGAQP PLVFAQALRV ALQGSAA