Gene Bphyt_5490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5490 
Symbol 
ID6278005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1693148 
End bp1693723 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content63% 
IMG OID642616574 
Producthypothetical protein 
Protein accessionYP_001889217 
Protein GI187920186 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.331066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAC TGCTTGGACG CGCTTGGTGG ATGCTCATCC TGCGTGGCAC GGTCGCGCTG 
CTGTTCGGCA CTCTGGCGCT ATTCTGGCCC GGTCTCACTC TGCTATTGCT CATCACCCTC
TTTAGCGTCT ACGCGATCGT CGGCGGCATT GTTGCGATTG TCGCGGCCAT CCGCTACCGC
GTGACGCACC GCGGCTGGTG GGTGCCCTTG CTGCTCGGCA TCTGCAGCAT CGCCGCCGGT
GTGATAGCCG CGCTAGTGCC GGGCATTACT ACGCTCGTGC TGGTCGCCGT CATTGGCGCA
AACGCGATGA TTACCGGCGT ATTCGATCTG ATCGCAGCAA CGCGGCTGCA CAGGCGTCTG
CGCAATGCGT GGATGCTGGT GCTCACCGGA GTGCTATCCG TGCTGTTCGG CATCTTCGTG
CTGCTCTTTC CGGGCGCGGG TGCACTAGCG CTCGTCTGGC TGATCGGCGT GTATGCGTTG
TTCACCGGCG CGCTGCTGGT CGTGCTCGGC ATCACTGCGC GTGCCTGGCA CCAGGATGGT
CTGACCGCCG AGCCACACGC GCCATTACAT CCGTAA
 
Protein sequence
MDELLGRAWW MLILRGTVAL LFGTLALFWP GLTLLLLITL FSVYAIVGGI VAIVAAIRYR 
VTHRGWWVPL LLGICSIAAG VIAALVPGIT TLVLVAVIGA NAMITGVFDL IAATRLHRRL
RNAWMLVLTG VLSVLFGIFV LLFPGAGALA LVWLIGVYAL FTGALLVVLG ITARAWHQDG
LTAEPHAPLH P