Gene Bphyt_5482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5482 
Symbol 
ID6278329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1686995 
End bp1688209 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content63% 
IMG OID642616567 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001889210 
Protein GI187920179 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.62329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.848973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATA CCGAAATCGC GCCCGCCGAA GCTGGGCAGC ACGACGAAAG AATCGCGCTG 
AGCAAGCTCT TCGAACCAGT CAAGGTGGGA CCGTACAACC TGCGCCATCG TGCTGTGATG
GCGCCGCTGA CGCGCTCGCG CGCCAGCCAG CCAGGCAACA TACCGTCTCA GCTCAACGCG
TGCTATTACG CCCAGCGTGC ATCGGCCGCG CTCATCATCA GCGAGGCGAC GCAGGTGTCG
ATGCAAGGAC AGGGCTATGC GTGGACGCCT GGGATTCATA GTCGCGAACA GGTGGAAGGC
TGGCGGCTCG TGGTGAACGC CGTGCACGAG GCGGGCGGAT TGATGTTCAT GCAGCTCTGG
CACGTCGGAC GCATATCGCA CCCCTCGTTG CAGCCCGATG AAATGCTGCC GGTAGCGCCG
TCTGCGGTCG AGCCAAAAGC GGAGGCGTTC ATCGAGAACG AGCGCGGCGA AGGTGTCGTC
GCGCCCTGCA TTACGCCCCG CGCGCTGCAG GTCGAAGAGA TGCCATATCT CGTGCGACAG
TACTTCAGGG GTGCGCGCAA CGCAAAGGCG GCTGGCATGG ACGGTGTCGA AGTGCACGCA
GCGAACGGCT ATCTGCTCGA CCAGTTCCTG CTGTCCGGCA CAAACCGCCG CACGGACTCA
TACGGCGGGT CGCGTGAGCG CCGGGCCAAG CTCCTGCTGG AGGTGATCGA GACGGTTTGC
GACGTGTGGG GACCGGAAAA GGTCGGCGTG CGGCTCTCGC CTCTGGGCAC CTTCAACGAC
ATGCATGACG ACGATCCCGA GGCGACCTTT TCTTACGTCC TCGAGAAGCT CAATCAATAC
GGGTTGGCGT ATTTGCACAT CGTCAATCCC GCGCTGGCGG CGACCAGTGA GGATGTCGCT
TTCACGGAGC GCGCCAAACG CATGAGCGAG ATGGTGCGGC GAACTTATCG TGGAGTGCTG
ATGGTCGCGG GCGGGTTCGA CGGTGGCAGT GCGGAACGAT GGCTCGAGGA GGGCAACGCG
GACCTGATCG CATTCGGACG CTTGTTCATC GCCAATCCGG ACCTGCCGGA ACGCTTACGA
TTGCACGCTC CGCTCAATTC ACCGGATCCG TCCACGTTTT ATGGAGGCGG CGAGCGCGGA
TATACCGATT ATCCATCGCT CGCGCAGGAG CGCGGAGAGG CCCCACGGTC CGTCATCGAT
GGACGTTGGA GATAG
 
Protein sequence
MPNTEIAPAE AGQHDERIAL SKLFEPVKVG PYNLRHRAVM APLTRSRASQ PGNIPSQLNA 
CYYAQRASAA LIISEATQVS MQGQGYAWTP GIHSREQVEG WRLVVNAVHE AGGLMFMQLW
HVGRISHPSL QPDEMLPVAP SAVEPKAEAF IENERGEGVV APCITPRALQ VEEMPYLVRQ
YFRGARNAKA AGMDGVEVHA ANGYLLDQFL LSGTNRRTDS YGGSRERRAK LLLEVIETVC
DVWGPEKVGV RLSPLGTFND MHDDDPEATF SYVLEKLNQY GLAYLHIVNP ALAATSEDVA
FTERAKRMSE MVRRTYRGVL MVAGGFDGGS AERWLEEGNA DLIAFGRLFI ANPDLPERLR
LHAPLNSPDP STFYGGGERG YTDYPSLAQE RGEAPRSVID GRWR