Gene Bphyt_5477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5477 
Symbol 
ID6279823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1682902 
End bp1684062 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content64% 
IMG OID642616562 
ProductMannitol dehydrogenase domain 
Protein accessionYP_001889205 
Protein GI187920174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAC CTATTCTTCA GTTTGGCACC AGCCGGTTCC TCCAGGCCCA TGTCGCGCTG 
TTCGTTTCGC AGGCGCTTGA GCGGGGCGAC GCAATCGGCG GCATCTGCGT GGTGCAGACT
ACCGACAACC CGTCCAGCCA GGCGCGCATC GCCGCACTGG CCCAGGCAGC CAGTTATCCG
GTGAAAATCC GCGGCAGGGA GGGCGGCGCG ATCGTGGACA CGGTCGTCGA TTGCCGCGCC
ATCCGCGCTG CCTGGATTGC CAATCGCGAT TGGGCGACGA TACGGCATGC GGCGATTCAT
GACGTGCGCG TGATCGTGTC GAACACGGGC GACATGGGCT ATCGCCTCGA CGAGCGTGAT
TCGCCCGCCC TGCTCGCGCG GGAGGGTCAG GCGCCGCACA GCTATCCCGC GAAGTTGCTC
ACGCTCCTTC ATGCACGGTG GCGTGAACGG CCTGACTCGG GCATCTCGAT CTTTCCGTGC
GAACTCGTCG CCAGCAACGG CGACACGCTG CGCGATCTGG TGACCGGCCT GGCTCGACAA
TGGGTGCTGC CCACGCCGTT TGTCGCCTAT CTGTCGCAGC GATGCATCTG GGTCAACTCG
CTGGTCGACC GCATCGTATC GGAACCGATC GAACCGGTAG GCGCGGTGGC CGAACCCTAT
GCGCTGTGGG CGATCGAGCG GCGCGCGGGC ATGGAACTGC CGTGTACGCA TGAACACATC
GTAGTCACTG ACGACCTGAG CAGCTACGAG CAACTCAAGC TGTTCTTTCT GAACCTCGGG
CATACGTGGC TCGCTGACCA ATGGCTCGCG CAGCGCCGAA GCGCGACCGA GACCGTCTTC
GATGCGATGA ACGATGGGCC GCTACGCGAC GGCATCGAGG CTGTGTGGGA CAACGAAGTG
TTGCCCGTCT TCAGTGCGAT GGGTTTGCGC GCTCGCGCCG TGCAGTACGT CGCGAGCGTG
CGCGAACGGT TTCTCAATCC GTACCTCGAT CACCGCATCG CGGACATTGC CAACCACCAT
GTCGAAAAGG TCCGGCGGCG AATCCTGCCG CTGATAGAGC TCGCCGACTC GCTGTCAGTC
GGATCCGGTC AGACGCGTCT GCGCGAAACG CTCGCACGGC ATGGACTGAC GTCCTCAACG
CAAAGGGCGG ACGCATCATG A
 
Protein sequence
MSEPILQFGT SRFLQAHVAL FVSQALERGD AIGGICVVQT TDNPSSQARI AALAQAASYP 
VKIRGREGGA IVDTVVDCRA IRAAWIANRD WATIRHAAIH DVRVIVSNTG DMGYRLDERD
SPALLAREGQ APHSYPAKLL TLLHARWRER PDSGISIFPC ELVASNGDTL RDLVTGLARQ
WVLPTPFVAY LSQRCIWVNS LVDRIVSEPI EPVGAVAEPY ALWAIERRAG MELPCTHEHI
VVTDDLSSYE QLKLFFLNLG HTWLADQWLA QRRSATETVF DAMNDGPLRD GIEAVWDNEV
LPVFSAMGLR ARAVQYVASV RERFLNPYLD HRIADIANHH VEKVRRRILP LIELADSLSV
GSGQTRLRET LARHGLTSST QRADAS