Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5477 |
Symbol | |
ID | 6279823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1682902 |
End bp | 1684062 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616562 |
Product | Mannitol dehydrogenase domain |
Protein accession | YP_001889205 |
Protein GI | 187920174 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAAC CTATTCTTCA GTTTGGCACC AGCCGGTTCC TCCAGGCCCA TGTCGCGCTG TTCGTTTCGC AGGCGCTTGA GCGGGGCGAC GCAATCGGCG GCATCTGCGT GGTGCAGACT ACCGACAACC CGTCCAGCCA GGCGCGCATC GCCGCACTGG CCCAGGCAGC CAGTTATCCG GTGAAAATCC GCGGCAGGGA GGGCGGCGCG ATCGTGGACA CGGTCGTCGA TTGCCGCGCC ATCCGCGCTG CCTGGATTGC CAATCGCGAT TGGGCGACGA TACGGCATGC GGCGATTCAT GACGTGCGCG TGATCGTGTC GAACACGGGC GACATGGGCT ATCGCCTCGA CGAGCGTGAT TCGCCCGCCC TGCTCGCGCG GGAGGGTCAG GCGCCGCACA GCTATCCCGC GAAGTTGCTC ACGCTCCTTC ATGCACGGTG GCGTGAACGG CCTGACTCGG GCATCTCGAT CTTTCCGTGC GAACTCGTCG CCAGCAACGG CGACACGCTG CGCGATCTGG TGACCGGCCT GGCTCGACAA TGGGTGCTGC CCACGCCGTT TGTCGCCTAT CTGTCGCAGC GATGCATCTG GGTCAACTCG CTGGTCGACC GCATCGTATC GGAACCGATC GAACCGGTAG GCGCGGTGGC CGAACCCTAT GCGCTGTGGG CGATCGAGCG GCGCGCGGGC ATGGAACTGC CGTGTACGCA TGAACACATC GTAGTCACTG ACGACCTGAG CAGCTACGAG CAACTCAAGC TGTTCTTTCT GAACCTCGGG CATACGTGGC TCGCTGACCA ATGGCTCGCG CAGCGCCGAA GCGCGACCGA GACCGTCTTC GATGCGATGA ACGATGGGCC GCTACGCGAC GGCATCGAGG CTGTGTGGGA CAACGAAGTG TTGCCCGTCT TCAGTGCGAT GGGTTTGCGC GCTCGCGCCG TGCAGTACGT CGCGAGCGTG CGCGAACGGT TTCTCAATCC GTACCTCGAT CACCGCATCG CGGACATTGC CAACCACCAT GTCGAAAAGG TCCGGCGGCG AATCCTGCCG CTGATAGAGC TCGCCGACTC GCTGTCAGTC GGATCCGGTC AGACGCGTCT GCGCGAAACG CTCGCACGGC ATGGACTGAC GTCCTCAACG CAAAGGGCGG ACGCATCATG A
|
Protein sequence | MSEPILQFGT SRFLQAHVAL FVSQALERGD AIGGICVVQT TDNPSSQARI AALAQAASYP VKIRGREGGA IVDTVVDCRA IRAAWIANRD WATIRHAAIH DVRVIVSNTG DMGYRLDERD SPALLAREGQ APHSYPAKLL TLLHARWRER PDSGISIFPC ELVASNGDTL RDLVTGLARQ WVLPTPFVAY LSQRCIWVNS LVDRIVSEPI EPVGAVAEPY ALWAIERRAG MELPCTHEHI VVTDDLSSYE QLKLFFLNLG HTWLADQWLA QRRSATETVF DAMNDGPLRD GIEAVWDNEV LPVFSAMGLR ARAVQYVASV RERFLNPYLD HRIADIANHH VEKVRRRILP LIELADSLSV GSGQTRLRET LARHGLTSST QRADAS
|
| |