| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5473 |
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| Symbol | |
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| ID | 6278154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1678952 |
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| End bp | 1679899 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616558 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001889201 |
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| Protein GI | 187920170 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.433436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.94425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TATCCGTGCT GGCTGCGGCC GCGGCGATGT GTGCAATGTT CAGCGCGTAC
GCGCAGGCGG CCGGCGGCGA AATTGCCGTG ATCGTGAAAA CGGCGAACTC CAACTACTGG
CAGAACGTCC AGAAAGGCGC CACGGCCGCC ATGGCGGATG CGAAGGGTTA CACGATGACC
TTCCAGGGCC CCGCGGCAGA GTCCGCCATC GCGGATGAAG TCAACATGGT CGAGAACGCG
GTGAACCGGC ATGTCGCCGG CATCGTGCTG GCGCCGTCCG ATCCCGACGC GCTCGTTCCG
GCCATGAAGA AAGCGTGGGA AGCCCATATT CCCGTGGTGC TGATCGACTC GACCGTGTCC
GACGCGGGCA AGCAGTATTA CCAGTCGTTC CTGTCGACCG ACAACACGAA GGCCGGCGAA
CTCTGTGCGC AGGCCATGAT CGATCGTGTC GGACAGACCG GCAAGGTCGC GATCATGTCG
TACGTGCCGG GCGCAGGTTC GGAAATCGGC CGCGTCGGCG GATTCCGCAA GTACATCACA
GCGCATTCCA AGCTGCAGGT GGTCGGGCCG TTCTATTCGC AATCGCAGAT GGCAACCGCG
CTGAATCAGA CGACCGACGT CCTGTCGGCC AATCCCGACC TCAAGGGCAT TTTCGGCGCG
AACGAGCCGA CCGCCGTGGG GATGGGGCGC GCGCTGGCCC AGTCCGGAAA AAGCGGCAAG
GTCATAGCAA TCGGTTTCGA TGGCAACCAG GACCTGCAAG GGTTCGTTCG CGACGGCACG
ATTCAGGCAA TCGCGGTTCA GAGTTCGTAC CAGATGGGCT ACAAGGGCAT CCAGACCCTC
GTCAATGTGA TCGAACGCAA ACCCGTCTCG AAGCAGGTGG ACACGGGCGT CATGATGGTC
GAAAAACAGA ACCTCGACTC ATCCGAAGCA AAGAACGTTC TCTACTAA
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| Protein sequence | MKKLSVLAAA AAMCAMFSAY AQAAGGEIAV IVKTANSNYW QNVQKGATAA MADAKGYTMT
FQGPAAESAI ADEVNMVENA VNRHVAGIVL APSDPDALVP AMKKAWEAHI PVVLIDSTVS
DAGKQYYQSF LSTDNTKAGE LCAQAMIDRV GQTGKVAIMS YVPGAGSEIG RVGGFRKYIT
AHSKLQVVGP FYSQSQMATA LNQTTDVLSA NPDLKGIFGA NEPTAVGMGR ALAQSGKSGK
VIAIGFDGNQ DLQGFVRDGT IQAIAVQSSY QMGYKGIQTL VNVIERKPVS KQVDTGVMMV
EKQNLDSSEA KNVLY
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