| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5472 |
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| Symbol | |
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| ID | 6279359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1677881 |
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| End bp | 1678912 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642616557 |
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| Product | Monosaccharide-transporting ATPase |
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| Protein accession | YP_001889200 |
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| Protein GI | 187920169 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.614199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.795246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAA TCACATCGGG CCCTAACCAG GCCCTCGACA GGCAGGTACA GCAGCGACGC
CGCGACCTGA TCCAGAAATT CGCGGCACTG GGCAGCCTTG TGGTGCTGAT CGTCGCGTTT
TCGCTAACCA GCGCGGCGTT TTTCTCGGTC GGCAACCTGA TGACAGTCGC GCTCCAGGTC
ACGTCCATCG CGTATCTCGG TGTGGCCGCA ACGTGCGTCA TCATCACCGG CGGCATCGAT
CTGTCGGTCG GCTCAGTGCT GGCGCTCGCG GGCGTCGCGG CCGCCCTGCT GGTCAAGGCA
GGCGTACCCA TCCCCGTCGC GATGCTCGGC GGCATGCTCG TCGGCGCCGC GTGCGGATGG
GTCAACGGTA TCTGCGTCAC GCGTATGGGG CTGCCGCCGT TCATCGCGAC CCTCGGGATG
ATGCTGGTCG CGCGCGGTCT CGCCCTGCAG ATCACCGGCG CAAGACCGGT CTCGGGGCTG
GGCGACGCGT TCGGCGAACT GGGCAACGGC GCCCTCTTCA GGATCTCCCA CATCGGCGCA
GACGGTTTTC CGGACACCGT CTTTCCAGGC ATTCCGTACC CGGTCGTGAT CATGGTGGTT
CTGTTCGCGG CTGTCTCCAT CCTGCTTTCG CGAACGTCGC TGGGCCGTCA CATTTACGCG
GTCGGCTCGA ACGCGGAAGC GGCGCGACTC TCCGGCGTCA ACGTGCAGGG CGTCAAGCTC
TTTACCTACG TGCTCTCCGG GCTGCTCGCC GGCGCCACCG GCTGCGTGCT GATGTCGCGC
CTCGTCACCG CGCAGCCGAA CGAAGGCGTG ATGTACGAGC TCGACGCCAT CGCAAGCGCG
GTAATCGGCG GCACGTCCCT GATGGGAGGC GTCGGCACGA TCTCCGGCAC CGCCATCGGC
GCATTCGTGA TCGGCGTGCT GCGCAACGGT CTGAACATGA ACGGCGTATC GAGCTTTATC
CAGCAGATCA TCATTGGTGT CGTCATTCTC GGCACCGTAT GGATCGATCA ACTCCGAAAC
CGGAAGTTGT AA
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| Protein sequence | MLEITSGPNQ ALDRQVQQRR RDLIQKFAAL GSLVVLIVAF SLTSAAFFSV GNLMTVALQV
TSIAYLGVAA TCVIITGGID LSVGSVLALA GVAAALLVKA GVPIPVAMLG GMLVGAACGW
VNGICVTRMG LPPFIATLGM MLVARGLALQ ITGARPVSGL GDAFGELGNG ALFRISHIGA
DGFPDTVFPG IPYPVVIMVV LFAAVSILLS RTSLGRHIYA VGSNAEAARL SGVNVQGVKL
FTYVLSGLLA GATGCVLMSR LVTAQPNEGV MYELDAIASA VIGGTSLMGG VGTISGTAIG
AFVIGVLRNG LNMNGVSSFI QQIIIGVVIL GTVWIDQLRN RKL
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