| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5469 |
|---|
| Symbol | |
|---|
| ID | 6279707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1674349 |
|---|
| End bp | 1675203 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642616554 |
|---|
| Product | transcriptional regulator, RpiR family |
|---|
| Protein accession | YP_001889197 |
|---|
| Protein GI | 187920166 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGACA GTTTCGACCA GCTCGCCGCC CTGATCCGGG CGCGCTTTTC CGAACTGAGT
CCGCAGTTCC AGATGGGAGC GGGTTTCCTG CTCGATCATC CCGACGAGGT CGCGGTCTCG
TCCATGCGCA AAGTGGCGGA ACGGGCGCAG GTGCAACCGG CCTCGCTGGT GCGTCTGTCG
CAGCAACTCG GTTTCCCCGG GTGGAACGAA TTGCGTAACC TGTTCGTCGC GCGCGTGCGC
ACGCGCCCCG AGCCGCTCAC GAGCCGCGCC CGCTCGCTCG TCAAATCGAA AGACGCGCTG
GCGAACGACC TGCTGGTCGC GCAGCAGCAC AACCTCGAGG TCACCGCCGC GCATAACGGC
CGTGTGATTG TTGAAGCCGC GCGTTTGTTG CGGCGCGCGC CGCATGTTCA TGTGGCCGGC
TTCCGGTCCT GTTACGCGGT GGCGTTCGGT CTCGTGTACG GTTACCGGCT GTTCCGTTCC
TCGGTGTCCT TGCTCAACGG CGAGGCCGGC ACGCTGGAAA TGCAACTGCG CACCATCGAG
CGTGACAGCG CGACCATCGT GATCAGTTTC GCGCCGTATT CGGTGGAGGC CGCGCGCGTG
GCCGAAGCCG CGCTGGAAAA AGGCAGCAAG CTGATTGCCA TCACCGACAG CGCCGTCTCG
CCGATCGCCT TGAACGCCGA CAAGGTGCTG ATCTTTTCGC ACGAGAGCCC GTCGTTCTTT
CCGTCGCTGG TGGCGGCTAC GGCGCTGGCC GAGTCGCTGG TCGCGCATCT GCTCGCGCTG
GAAGGCGCGG ATGCAGTCGA ACAACTCGCC ATCGCGGAGC AGTCGCTGCA CGCGAAGGGC
GCATACGTGC CTTGA
|
|---|
| Protein sequence | MPDSFDQLAA LIRARFSELS PQFQMGAGFL LDHPDEVAVS SMRKVAERAQ VQPASLVRLS
QQLGFPGWNE LRNLFVARVR TRPEPLTSRA RSLVKSKDAL ANDLLVAQQH NLEVTAAHNG
RVIVEAARLL RRAPHVHVAG FRSCYAVAFG LVYGYRLFRS SVSLLNGEAG TLEMQLRTIE
RDSATIVISF APYSVEAARV AEAALEKGSK LIAITDSAVS PIALNADKVL IFSHESPSFF
PSLVAATALA ESLVAHLLAL EGADAVEQLA IAEQSLHAKG AYVP
|
|---|
| |