| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5468 |
|---|
| Symbol | |
|---|
| ID | 6279730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1672747 |
|---|
| End bp | 1674075 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642616553 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001889196 |
|---|
| Protein GI | 187920165 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.207505 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCG TTTTTCATCG TTTGCCTAAA CAGTCGCTGC CGGTCGCCGT CGCGGGCGAC
GGCATCGAGA TCATCGATTC CACCGGCAAG CGCTATATCG ACGCGTCGGG CGGCGCGGCC
GTCTCGTGTC TCGGTCACAG CAACCAGCGC GTGATCGACG CGATCAAACG GCAAGCGCAG
CAGTTGCCGT ATGCGCACAC GTCGTTCTTC ACCACCGCGC CTGCCGAAGA ACTCGCGGAC
CGGCTGGTCG CAAGCGCGCC GCAGGGGCTC GAACATGTCT ATTTCGTGTC GGGTGGTTCG
GAGGCGATCG AGGCGGCGCT GAAACTCGCG CGCCAGTATT TCGTGGAGAA GGGCGAGCCG
CAGCGCCGCC ATTTCATCGC GCGTCGGCAG AGTTATCACG GCAACACGCT CGGCGCGCTG
GCGATCGGCG GCAATGCATG GCGCCGCGAG CCGTTCCTGC CGATTCTGAT CGAAGCGCAT
CACGTGAGCC CGTGTTACGC GTATCGCGAG CAGCGCGCCG ACGAAACCGA AGAGGCCTTC
GCGCAGCGTC TCGCCGATGA ACTCGAGCAG AAGATTCTCG AACTCGGCGC GGACACGGTC
GCGGCCTTCG TCGCGGAAAC AGTGGTCGGC GCGACGGCCG GCGCAGTACC GCCGGTGCGC
GAGTACTTCC GCAAGATTCG CGCGGTATGC GATCGCTACG GCGTGCTGCT GATTCTCGAC
GAGATCATGT CGGGCATGGG CCGCACCGGC CACCTGTACG CCTGCGAGGA AGACGGTGTG
GCGCCGGACA TCCTGACCAT CGCCAAAGGG CTCGGCGCGG GCTATCAGCC GATCGGCGCG
ACGCTCGTGA GCGACCGGAT CTATCAGGCG ATCGTCGGCG GCTCGGGGTT CTTTCAGCAC
GGCCATACCT ACATCGGCCA CGCCACCGCT TGCGCCGCGG CGCTCGAAGT GCAGCGCGTG
ATCGAGGAAG ACAAGCTGCT GCCCAACGTG CTCGCGCGCG GCGAACAATT GCGTGGCCAA
CTGCGCGAGC ATTACGCGCA GCATCCGCAT ATTGGCGACG TGCGCGGCCG GGGGCTGTTC
GTCGGCGTGG AACTGGTCAG GGACCGGGCC GGCAAGACGC CTTTCGACGC CCGGCTCAAG
CTGCACGCGG TGATCCGGCG CGAGGCGTTC GCGCGTGGTT TGATGGTGTA TCCGATGGGC
GGCACCGTCG ACGGCCAGAT CGGCGATCAT GTGCTGCTGG CGCCGCCGTT CATCTGCACC
GAGCGCGACA TCGACGAGAT CGTCAGCCGG TTCACGGATG CGGTCGGCGG CGCGCTCGCC
GCCATTTGA
|
|---|
| Protein sequence | MSTVFHRLPK QSLPVAVAGD GIEIIDSTGK RYIDASGGAA VSCLGHSNQR VIDAIKRQAQ
QLPYAHTSFF TTAPAEELAD RLVASAPQGL EHVYFVSGGS EAIEAALKLA RQYFVEKGEP
QRRHFIARRQ SYHGNTLGAL AIGGNAWRRE PFLPILIEAH HVSPCYAYRE QRADETEEAF
AQRLADELEQ KILELGADTV AAFVAETVVG ATAGAVPPVR EYFRKIRAVC DRYGVLLILD
EIMSGMGRTG HLYACEEDGV APDILTIAKG LGAGYQPIGA TLVSDRIYQA IVGGSGFFQH
GHTYIGHATA CAAALEVQRV IEEDKLLPNV LARGEQLRGQ LREHYAQHPH IGDVRGRGLF
VGVELVRDRA GKTPFDARLK LHAVIRREAF ARGLMVYPMG GTVDGQIGDH VLLAPPFICT
ERDIDEIVSR FTDAVGGALA AI
|
|---|
| |