Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5462 |
Symbol | |
ID | 6278561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1667068 |
End bp | 1668654 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616547 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001889190 |
Protein GI | 187920159 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.432135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCG AAGCGATCAA GTCCGCTCCG GCGGCAAGCG TTGGAGCTCA AGGCGCCGCC GCCTCAGCGG TGATCTGTCC TGGCTCTGCG GCCGCGAATC TGGCGACGGG CGTCGCAATG GGCGTCGCAA AGGGCCATGC CAAGGGCGCG GCACCATCGG CCGACAACGC TCGCCCGCGC TTCGAACGGC AAGGGCTTGC GCTGGCGGTG CTGTTCGTCG GCGCCTTCCT TGCGCCGCTC GACTACTTCA TCGTCAATCT CGCGCTGCCC TCGATCCACA CCGGCCTGAA CGCCACCGAC GCACAATTGC AACTCGTGGT CTCCGCCTAT GCGTCGGCGT ACGCGGTTCT GCTGATCACG GGTGGGCGGC TCGGCGATCT GTTCGGCCGC CGCCGCATGT TCATGACGGG CATGGCGGCG TTCGTGGTCG CCTCGGCGCT GTGCGGCTTC GCGACCAGTG GGCACATGCT GGTGATCTCG CGGATCGTGC AGGGCATCGC GGCCGCCGTC ATGGCGCCGC AAGTGCTCGC CACGATTCGC GCCGTGGTGC CGCTGCATCA GCAGACCAAG GTGATGAGCC TGTATGGTTT CGTGTTCGGC TTGTCGTCGA TCGTTGGGCA GTTGGGCGGC GGCGCGCTGA TCACGTATCA CCCGTTCGGA CTCGACTGGC GCATCATCTT TCTGATCAAC ATTCCGATCG GCATCGCGGC GTTTGTCGGC ACGTGGAAGT TCGTGCCGGA AAATCAGCCG GCCACGCGAA CCGGCATCGA CGTGAAGGGC GTGGCGCTGC TGTCCGCCGT GCTGCTGCTG GTCATCTACC CGATGACGCA CGGCCGCGAG GCCGGCTGGC CGGCGTGGAC CTTCGTGATG TTCGCGCTTG CCGTGCCGGC GTTCGCGCTC TTCGTGACGA CCGAGCAACG CGTGGAGCGC GGCGGCGGCC ATCCGCTCGT GGACCTGCAA TTGTTCCGCA ACCGGGCCTT CGCGCTGGGT CTCGTGCTCG CGTTCCTGTT TTACTGCAAT AGCGCGTTTT TCCTGACCTA CGGGATCTTC CTGCAAACCG GTCTGCACTG GACACCGCTC GCCTCGGGCA TGGCGATCAT GCCGTTCGCG ATCGGTTTCG TCGTCGGGCC GCTGACCTCG CCGGCGGTGG TCAAGCGCAT CGGCGGCCAT GTGCTCACGC TCGGTTTTTC GATGATGACG GTCGGCTTCA CGGTCACGGG TTGGTCCGCC ACGCAGTCGG CCACGCCGGA TCTGCTGTTC TATTGCGGAC TGGTGTGCGC CGGCGTCGGT CACGGCCTGC TGCTGCCGTC GATCATGCGC ATCGTGTTGC TCGAGGTCGT GCCGGAGAAA GCCGGGCTTG CTTCCGGCGT GGTGTCGTCG ACGCTGCAGA TCGGCTCGGC GTTCGGCACG GCCGCCATCA GCGGTGCGTT CTTCGGCGCA ATCGGCGCTC GCGCGACGTC GGGCGACTAC GCGCACGCGT TCCAGATCAG CCTCGCGATC AACGCAGCCC TGATGTTCGT ATGCATTGGC TTGAGTGTGC TGCTCGTGCG GCACCAGCAA CTCCAGGCTG TCGCCCGCGC TCAATAG
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Protein sequence | MKSEAIKSAP AASVGAQGAA ASAVICPGSA AANLATGVAM GVAKGHAKGA APSADNARPR FERQGLALAV LFVGAFLAPL DYFIVNLALP SIHTGLNATD AQLQLVVSAY ASAYAVLLIT GGRLGDLFGR RRMFMTGMAA FVVASALCGF ATSGHMLVIS RIVQGIAAAV MAPQVLATIR AVVPLHQQTK VMSLYGFVFG LSSIVGQLGG GALITYHPFG LDWRIIFLIN IPIGIAAFVG TWKFVPENQP ATRTGIDVKG VALLSAVLLL VIYPMTHGRE AGWPAWTFVM FALAVPAFAL FVTTEQRVER GGGHPLVDLQ LFRNRAFALG LVLAFLFYCN SAFFLTYGIF LQTGLHWTPL ASGMAIMPFA IGFVVGPLTS PAVVKRIGGH VLTLGFSMMT VGFTVTGWSA TQSATPDLLF YCGLVCAGVG HGLLLPSIMR IVLLEVVPEK AGLASGVVSS TLQIGSAFGT AAISGAFFGA IGARATSGDY AHAFQISLAI NAALMFVCIG LSVLLVRHQQ LQAVARAQ
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