Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5451 |
Symbol | |
ID | 6277787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1649595 |
End bp | 1649948 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642616536 |
Product | alkylhydroperoxidase like protein, AhpD family |
Protein accession | YP_001889179 |
Protein GI | 187920148 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.528829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.936262 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAACT GGATCGATTA CCGTCAAGAA CTGTTCGGCC GTATCGGCGA GATCGCCAAG CTGTCGCCGG ATACCGTCAG GGGCTATCAG GCGCTCTCGA GCGCCGGTCA GAAGAAGGAC CTGCTCGGCG CCAAGACGCG CGAACTGATC GCGCTCGGGG TGGCGGTCAG CCTGCGATGT GACGGCTGTA TTACCGTGCA CACCGCCGAA GCGCTCAAGC ACGGCGCGAC GCGCGAGGAA ATCGCCGAAG CGCTGGGCGT GGCGGTGGCC GTCAATGCCG GGGCCGCGAT GGTGTACTCG GCCCGTACGA TCGATGCCGC CGCGGCATAT GCGGAGCAGG CGGCCGCGGA ATAA
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Protein sequence | MLNWIDYRQE LFGRIGEIAK LSPDTVRGYQ ALSSAGQKKD LLGAKTRELI ALGVAVSLRC DGCITVHTAE ALKHGATREE IAEALGVAVA VNAGAAMVYS ARTIDAAAAY AEQAAAE
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