| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5442 |
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| Symbol | |
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| ID | 6278034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1642128 |
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| End bp | 1642679 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616527 |
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| Product | intracellular protease, PfpI family |
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| Protein accession | YP_001889170 |
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| Protein GI | 187920139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.484256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGCA CGCTGAATGG TTACAAGGTG GCGGTACTCG CAGTGGACGG ATTCGAGCAG
GCCGAACTGA TCGAGCCGCA ACGCGCGCTC GTCGAGGCAG GCGCGACGGT GCATGTCATT
TCAGCGAAGC CCGGCAAGAT TCAGGGTTTC AAGCACGTGG ACAAGGGCGA TGCCGTCGAG
GTGGATACGA CGTTCGACAA GTCCAGCGCG GACGACTACG ACGCGGTGGT GTTGCCAGGC
GGTGTGGTCA ACGGCGACGC GATCCGTCTG CTGCCGCAGG CGCAAGCCTT CGTCAAGGCA
GCCGACAACG CGAAGAAGCC GATCGCGGTG ATCTGCCATG GCGGTTGGTT GCCGGTGTCG
GCCGGAATCA TCAAGGGCCG CACGATGACG AGTTGGCCGA GCCTGCAGGA CGATATTCGG
AATGCGGGCG GCACGTGGGT CGATCAAGAG GTAGTCGAGG ACGGCAATCT GATCAGCAGC
CGCAAACCCG ACGATCTCCC CGCCTTTAAC AAAACGCTGA TTGCGCAATT GTCGAAGCGC
AGGGCGGCAT GA
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| Protein sequence | MASTLNGYKV AVLAVDGFEQ AELIEPQRAL VEAGATVHVI SAKPGKIQGF KHVDKGDAVE
VDTTFDKSSA DDYDAVVLPG GVVNGDAIRL LPQAQAFVKA ADNAKKPIAV ICHGGWLPVS
AGIIKGRTMT SWPSLQDDIR NAGGTWVDQE VVEDGNLISS RKPDDLPAFN KTLIAQLSKR
RAA
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