Gene Bphyt_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5439 
Symbol 
ID6280240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1640455 
End bp1641036 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID642616524 
Producthypothetical protein 
Protein accessionYP_001889167 
Protein GI187920136 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.627744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTCA TCGTCGCAGC ACGCTTTACG ACTTTCCCCG CCGCTGAAGA CGCGGCGGCC 
AAGCTCTTCA ACGCAGGTTT CGTCGAGGAA GACGTCACGC TGTTTTTCGT CAATCCACGC
GGTCAGCACG CGCGCTATCC GATCGGCGGC GACACCGGCA CCGATGCTGG CGCGAAGGAT
GCGCCCAAAG GCGCCGGCTT GGGCGTCACG ATCGGTGCGG TAGCGGGCGC CGTGGTGGGC
GTCGGGATCT TCGCGGCTTT TTCCGCGCCG ATCATCGTGT CGTTGATTGC CGCGGGCGTC
GGCGCATATG TCGGCTCTTT GGTCGGAGCT ATGTCGCGTA CGCGCGACGC CGGCCACGCA
GGGCATCGTT CTGCATTCCA TGAAGAGACG CGCGATTCCG GTGTGCTGGT CGCCGTGCAC
GTCTCGCCGG ACAATCAGTT CGATGCCGCG CGCGTGCTGC GCGAAGCCGG CGGCACGGCG
ATCGAGCGGG CGAGTGGACG CTGGCAGCAA GGGCGCTGGG CCGACTTCGA TCCGTTGAAA
AAGCCGGTCC CGCTTGGCGA GTTCAGTGAG AAGAGCGCTT GA
 
Protein sequence
MSLIVAARFT TFPAAEDAAA KLFNAGFVEE DVTLFFVNPR GQHARYPIGG DTGTDAGAKD 
APKGAGLGVT IGAVAGAVVG VGIFAAFSAP IIVSLIAAGV GAYVGSLVGA MSRTRDAGHA
GHRSAFHEET RDSGVLVAVH VSPDNQFDAA RVLREAGGTA IERASGRWQQ GRWADFDPLK
KPVPLGEFSE KSA