| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5429 |
|---|
| Symbol | |
|---|
| ID | 6280034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1629508 |
|---|
| End bp | 1630278 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642616514 |
|---|
| Product | protein of unknown function DUF224 cysteine-rich region domain protein |
|---|
| Protein accession | YP_001889157 |
|---|
| Protein GI | 187920126 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGT TTCTTTTCAA AGAGCTTATG AAAGTCGCCC TGTTCATCCC GTGTTTCATC
GACGCTTTCT ATCCCGAAGT AGGGATCGCC ACGCTCGAAT TGCTCGAACG CTTCGGCATA
CAGGTCGACT ATCCGCAGGA GCAAACCTGC TGCGGCCAGC CGATGGCCAA CAGCGGCGCG
CATGCCGAAG CAGCCGGCAC CGAGCGTGTG TTCGCGCGCA ACTTCGCGGG CTATGACTAC
ATCGTCGGGC CGTCGGCGAG CTGCATCCAT CACGTGCGCG AGCATCTGAC CGCGCTCGAA
CAAACCGACG AAGTGAAGAA GGTCCGCGCG AACGCGTATG AACTCGTCGA GTTTCTGCAC
GACGTGGTCG GTGCGCGTGA ATTTCCGTGG GCCGAGTTTC CGCATCGCGT GGGCTTGCAT
AACAGTTGCA GCGCGTTGCG GCATCTGAAG GAAGCGTCGA TTTCGGAAGT GGCGGGCGCG
CCGTTTTCGA AGCCGCGTAC CTTGCTCGAA GGCGTGAAGG GCATCGAGTT CGTCAAGCCG
GCGCGGCCCG ACGAATGCTG CGGTTTCGGC GGCACGTTCT CCGTCACCGA AGAGCCGGTG
TCGGTACGCA TGGGGCAGGA CAAGGTGCGC GACCATCTGA ACGCGGGCGC CGAATACATC
GTCTCGGGCG ACATGTCGTG TCTCATGCAT CAGCAAGGCT GCGCGGAACG CATGAAAGCC
GACGCGCGCT TCATCCATAT CGCGCAGGTC CTCAACGGAG CACGCGCATG A
|
|---|
| Protein sequence | MPLFLFKELM KVALFIPCFI DAFYPEVGIA TLELLERFGI QVDYPQEQTC CGQPMANSGA
HAEAAGTERV FARNFAGYDY IVGPSASCIH HVREHLTALE QTDEVKKVRA NAYELVEFLH
DVVGAREFPW AEFPHRVGLH NSCSALRHLK EASISEVAGA PFSKPRTLLE GVKGIEFVKP
ARPDECCGFG GTFSVTEEPV SVRMGQDKVR DHLNAGAEYI VSGDMSCLMH QQGCAERMKA
DARFIHIAQV LNGARA
|
|---|
| |