| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5426 |
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| Symbol | |
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| ID | 6278149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1626585 |
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| End bp | 1627469 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616511 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001889154 |
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| Protein GI | 187920123 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.954201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC GGCATCTCCG ATACTTCGTC GCCGTTGCGG AGCACGCGAG CGTGCGCGGC
GCCTCCGAGC AGCTTCACGT AACCCAGCCG GCCATTTCGC GGCAAATCCA GGACCTCGAA
GAAAGCTTGG GCGTCGCGCT ATTCGAGCGC ACGCCGCGCG GCCTCAAGCT GACGCTCGCG
GGCGACGCCT ATTTGCGCGA GGCGCGCGGC ATTCTGCAGC AGGTCGAGTC GGCCGCGCGT
GTGGCGCAGC GGATCGCGGC GGGCGTGTCG GGGCATGTGC GCATGGGGTT CGTCGAAAAC
GCGGTGTGGG GCGGCCTCGT TCCGAATGCG CTGCAAGCAT TTCAGCAGAC GGCGCCGCAG
GTCGGCATCG AACTCACGCC GATGAACACG CCCGAGCAAC TGGCCGCGAT CGAAGCGGGC
CAACTCGACG GCGGCTTCAT CTATCGCTTC GGCGCGCTGC CTGAGCAGTT CGTCAGCTTG
CCTTTGCTCG AAAACGGCGT CGTGCTGGCG GCGCCGGCCG CATGGTCGTT CGGGCGGCGC
AAGACGGTGC GCGCCGCGCA ACTCGCCGGC AAGCCCTTCA TCACGTTTCC CCGCCATGTC
TATCCCGCTT ATTACGACCG CCTGATCGGC GCGTGCGAGC GCGCCGGTTT GACGCTCGAT
GTCGTGCAGG AAGTGTCGAC GGAAGCCGCG ATTCTCTCGC TCGTTTCGGC GGGCGTGGGC
GCGGCGATCG TCAACTCGGC CAATCGCGAG CGGCCGCCGG CGCTGGTGCA ATTCCTCGCA
CTGTCCGATG TGTCGATCGC GCTGCCGTTG CATTTTGCGT ATCGCGAGCA GCACCGCAAT
CCCGCGCTCG CGCAGTTCAT CGCCTTGCTC CAGGCGCAGA AGTGA
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| Protein sequence | MELRHLRYFV AVAEHASVRG ASEQLHVTQP AISRQIQDLE ESLGVALFER TPRGLKLTLA
GDAYLREARG ILQQVESAAR VAQRIAAGVS GHVRMGFVEN AVWGGLVPNA LQAFQQTAPQ
VGIELTPMNT PEQLAAIEAG QLDGGFIYRF GALPEQFVSL PLLENGVVLA APAAWSFGRR
KTVRAAQLAG KPFITFPRHV YPAYYDRLIG ACERAGLTLD VVQEVSTEAA ILSLVSAGVG
AAIVNSANRE RPPALVQFLA LSDVSIALPL HFAYREQHRN PALAQFIALL QAQK
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