| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5420 |
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| Symbol | |
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| ID | 6278732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1615872 |
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| End bp | 1618541 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616505 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001889148 |
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| Protein GI | 187920117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAC TATTCCCAAT CTGGCTTGTC TTCCTCCTCG CTTTCATCGC CGCGCCGGTT
TTCGCCGCCA CCGCGCCGGC CGCGCCCGCA TCGTCGGCTT CCGGCGTCGG CGTCACGCTG
ACGCCCGAGC AGGCCCGCCA GGCACTCGCC GTCCTCAATG ATCCCAAGCG CCGCGCGCAA
GTCGCCGACA CGCTGCAGGC CATCGCCGCC GCCGGCGCGC TGAGCGCGCC GCCCGCTTCC
GCGCCCGCGG CCGCCTCGGC GCCCACCGCG GCAAGCGGCG CCGCCGCGCT CGTGCCGGCG
GCGTTCAAGT CGAACGGCCT CGCCTCGCAA CTGGCCCGTC AGGGCGCGCA CTGGGCCGTC
CACCTCGGTA CGTCGTTGCG CAGTTCGATC GCCGCATTGC TCGACGTCGC CTCGGTCCGC
GCCTGGTGGA ACTGGCAGTC GACCAACCCG CAAGCGCGCG CCGTGCTCGG CCACGTCGCC
TGGTCGCTGC TGGCCGCGCT GATTCCCGCG CTCGTGCTCG AATGGCTCGC GCGCCGCCTG
CTGCGCCGCG CATACCGGGC GCTGGCCGCG CGCCGCGAAC TGGAAGAGGA AGACGACGCC
GCGCGCGCCG ACCTGCCCGT CGACGTCGCG CCCCAACCCG CCGACGCGCC GAACGCCGCG
CCGCCCTTGC CCGCTTCTCC GGCTTCGCCG GTCAGCGCGG CGCAGGCACA AGCCGAGGCC
GCGCCGGCAG GTACCTCGGC CGCCACGAAG GCTAAAGGCA AGGTCAACGA AGCCAAAGGC
AAACAGAACG CCAAACACCA CTGGACGCTC CTGCGCCGCC TGCCGCGCGC GCTCCTGACG
ATGGTGCTGC GGCTGCTGCC GCTGGTAGTG TTCGTCGGCG CGGCGAGCGC GCTCATGTCG
ATCTTCACCG ACGACGGCAC GCCGCAAGAT CGCGCGCTCG ATTCGCTGGT CGATATCTAC
GTGCTGTGCC GGGTGATCGT GATTGTCAGC GGTTTCTTCC TGCAGCCGGC CGCGCCGCGT
TTGCGCCTGC TGCGCATGAG CGATGCGTGG GCCGCCTTCA TGCAGCGCTG GGTGGTGCGG
ATCGTCAGCG TGGTGGGCGC AGGTTCCGCG ATCGCGGAGA TCGCGCAGTC GCTCGGCCTG
AACGACGCGG CGCATCTCGC CTTGATGAAA GTGGTTGCGC TCGCCGGCCA CGTCCTGATT
TCGATTCTGC TGCTGCAATG CGCGAACCCG GTCGGCGAAC TGATCCGCAA GCGCGTCGCC
GAGCGCAAAT CGCTGGAGAT CGTCGGCAAT GTCTTCGCCG AGGTCTGGGC GTGGGCCGCG
GTGTTCGTCG TGATGGCGCT GTGGTTCGTC TGGGCGCTCG ACGTGCAGAA CGGCTATCAC
GCGCTGCTGC ACCTCGGCGG CATTTCGCTG GCGGTGCTCG TGGGCGCGCG GGTCGTGTCG
ATCGTGGTGT TCGGGGCGCT GGCCCGGCTC TTCAATGTGC AGGACGACGC GACGAAGTCG
CTCGTGCATC TGCATGCGTA CCGCTATTAC CCGCTGCTGC GCCGTGTGGT GGCGTGGGTG
ATCGGCGTCG TGACCGCGCT CGCGTTGTTG CAGGTGTGGG GCGTGCATGT GGTCGACCTG
TTCCGTACGG GCACGATCGG GCACCGGCTC GCATCGGCGA TCATCACGAT CGGCGTGGCC
GCCGTGATCG CGCTGCTCGT GTGGGAAGGC GTCAATGTCT CCGTCGAACA GCGGCTCGAC
CGCTGGACCG CCAGTGGCGA CCTCGTACGC GCCGCACGCT TGCGCACCCT GTTGCCGATG
CTGCGCAGCG CGCTCTTCTG CGCGATCGCG CTGGTGGTGG TGCTGACTGG TTTGAGCGAA
CTCGGCGTGA ACATCGGGCC GCTGCTCGCG GGCGCGAGTA TCTTCGGCGT GGCGCTCGGT
TTCGGCTCGC AAAAGCTGGT GCAGGATTTC ATCACCGGCA TTTTTCTGTT GATGGAAAAC
GCGATGCAGG TCGGCGACTG GGTCACGCTC GCGGGCGTGT CCGGCACCGT CGAATACCTG
TCGATCCGCA CCGTGCGGCT GCGCGGCGGC GACGGCTCGC TCTACACCGT GCCGTTCAGT
TCGGTGTCGA CGGTGAACAA CACGAATCGT GGCATCGGCA ATGCGGCGGT GAAGGTCAAC
ATCGTGTTCG GGCAGGATGT CGATCTCGCC ATCGACACCT TGAAAGAAAT CGGCGCCGCC
TTGCGCGAGG ACGACAAGTT CAAGGACGGC ATTCTGTCGG ACTTCAGCTT CTGGGGCGTC
GATGCGCTTG ACGGCTCCGC CATCACGCTG GCCGGGCAAA TTCAGTGCCG CGACAGCGCG
CGCTGGGGCG TGCAGCGCGA ATTCAACCGG CGCATCCTGT TCCAGTTCCA GGAGCGCGGC
ATCGAGATCG CGAACCCGCA GCGCAATCTG TTGACGTGGG ATCCGGAAAG CGCGCCGGCC
AGGATCGAAG CGGACGACGC GCACAAAGAC GGACCGGGCT CATCAAGCAC AACGCAGAAC
GAATCGCCCG CCTCAGCGCC GTCCACCGAC GCCGCCGATG CCGGCGGCAA AGCCGACGCG
CCGGTGGAAG ACCAGTTGCC CGTCGATCCT AAGCCGGCTG GCGGCCCAGG AACGCCAGCA
AATCCTGGTT CAACCTCTCC GCATGAGTGA
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| Protein sequence | MRKLFPIWLV FLLAFIAAPV FAATAPAAPA SSASGVGVTL TPEQARQALA VLNDPKRRAQ
VADTLQAIAA AGALSAPPAS APAAASAPTA ASGAAALVPA AFKSNGLASQ LARQGAHWAV
HLGTSLRSSI AALLDVASVR AWWNWQSTNP QARAVLGHVA WSLLAALIPA LVLEWLARRL
LRRAYRALAA RRELEEEDDA ARADLPVDVA PQPADAPNAA PPLPASPASP VSAAQAQAEA
APAGTSAATK AKGKVNEAKG KQNAKHHWTL LRRLPRALLT MVLRLLPLVV FVGAASALMS
IFTDDGTPQD RALDSLVDIY VLCRVIVIVS GFFLQPAAPR LRLLRMSDAW AAFMQRWVVR
IVSVVGAGSA IAEIAQSLGL NDAAHLALMK VVALAGHVLI SILLLQCANP VGELIRKRVA
ERKSLEIVGN VFAEVWAWAA VFVVMALWFV WALDVQNGYH ALLHLGGISL AVLVGARVVS
IVVFGALARL FNVQDDATKS LVHLHAYRYY PLLRRVVAWV IGVVTALALL QVWGVHVVDL
FRTGTIGHRL ASAIITIGVA AVIALLVWEG VNVSVEQRLD RWTASGDLVR AARLRTLLPM
LRSALFCAIA LVVVLTGLSE LGVNIGPLLA GASIFGVALG FGSQKLVQDF ITGIFLLMEN
AMQVGDWVTL AGVSGTVEYL SIRTVRLRGG DGSLYTVPFS SVSTVNNTNR GIGNAAVKVN
IVFGQDVDLA IDTLKEIGAA LREDDKFKDG ILSDFSFWGV DALDGSAITL AGQIQCRDSA
RWGVQREFNR RILFQFQERG IEIANPQRNL LTWDPESAPA RIEADDAHKD GPGSSSTTQN
ESPASAPSTD AADAGGKADA PVEDQLPVDP KPAGGPGTPA NPGSTSPHE
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