Gene Bphyt_5419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5419 
Symbol 
ID6277572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1615169 
End bp1615519 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content62% 
IMG OID642616504 
ProductNIPSNAP family containing protein 
Protein accessionYP_001889147 
Protein GI187920116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.65749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATTA CCTGCTTCAT CCGCTACCAG ATCGATCCGT TCCAGCGCGA TGCCTTCGAC 
GAATACGCCC GCAACTGGGG CCGCATTATT CCGCGCTGCG GCGGCCATCT GATCGGCTAT
TTCCTGCCGC ACGAGGGGAC TAACGACATC GCGTGGGGTT TGATCGCGTT CGACAGTCTC
GCAGCCTATG AAGCATATCG GGCGAGACTG CGCGCCGATA CCGAGGCTCG CGACAATTTC
ATGCTGGCCC AAACGAAGCG CTTCATTCTG CGCGAGGAGC GCACTTTCAC CGAAGTCGTG
GAAGGCACTT TGGGTGTGCC GCCGGTGCGC CGGGCGGCGG CGACGGAGTG A
 
Protein sequence
MAITCFIRYQ IDPFQRDAFD EYARNWGRII PRCGGHLIGY FLPHEGTNDI AWGLIAFDSL 
AAYEAYRARL RADTEARDNF MLAQTKRFIL REERTFTEVV EGTLGVPPVR RAAATE