| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5418 |
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| Symbol | |
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| ID | 6278856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1613277 |
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| End bp | 1615028 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642616503 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001889146 |
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| Protein GI | 187920115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.97043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGACC CGCACGCACC GGCGCTCGAG CGCCGTTCCT CGTCCGTTCT GCCCGCTCAG
GCCAGCCCGT GCGATGCGCT CGTCATCCGC GCGCAGCCTC TCAGTTCCGT CCACCCGTGC
CGGCGTAAAA AACTCGCGCT GGCCGCGACC ATCCTCGGTT CGAGCATGGC CTTCATCGAC
GGCTCCGTGG TCAATGTCGC CTTGCCGTCT ATCCAGAGCG AACTGGGCGC GAGCGTGGCG
GCGATCCAGT GGGTCGTGGA CGCCTATCTG CTGTTTCTCG GCGCGCTCGT GCTGGTGGGC
GGCTCGCTCG GCGACAAGCT CGGCCGGCGC ACGGTGTTCA TCGCGGGAAT CGGGCTGTTC
ACGCTGGCCT CGATCGGCTG CGGCCTCGCG CCGGGGGCCG CCGCCCTGAT TGCGGCGCGC
GCCGTGCAAG GCGTGGGCGC GGCGCTGCTG GTGCCGAGCA GCCTGTCGAT CATCGGCGCG
GTGTTCGACG ACAAGGAGCG CGGCCAGGCG ATCGGCACCT GGGCCGGCGT CGGCGCGATC
ACCTCGGCGC TCGGGCCGGT CGCGGGCGGC TGGCTCGTCG ATGCGTTTTC GTGGCCAGCC
ATCTTCTTCC TGAACGTGCC GATTGCGTGT GCGACGGTGG CGCTGGCGGT CATGGCCGTG
CCGGATAGCC GGCAGGACGA TGAGGGAAAT TCGTCCACGC TTGCCGGCGG GACCACTGGA
CACGCGGCGG CCCGCCTCGA CTGGCCGGGC GCCGCCACGG CCACCGCCGG TCTTGCCGCC
CTGACCTACG GCCTGACCCT TGCCTCGGCG CGCGGCTTCG GCAACCGCTG GGTGCTGGCG
TCGATCCTCG GCGGTCTGCT GGTGCTGATC GCTTTTGTCG CGCTCGAAGC GAGAACCCGC
AATCCGATGA TGCCGCTCGA CGTGTTCCGT TCACGCGACT TTGTCGGCGC CAATCTCGTC
ACGCTACTGC TCTACTTCGG CTTGGGCGGT GCGCTGTTCT TCCTGCCGTT CACGCTCATC
CGCGCTTACG GTTACAGCGC GACCCAGGCG GGCGCGGCGT TGCTGCCGGT GCCGGTGACC
ATCGGCCTGC TGTCGCGCTT CACCGGCGGC CTGACGAGCC GCTACGGCGC GCGCGCCTTG
CTGACGGCGG GCCCGGTCGT CGCCGCGGCC GGCTTCGCGA TGCTCGCGCT GCCGTGGGTC
CGCGGCGACT ACTGGCGCGG CTTTCTGCCC GCGCTGACCG TGCTCGGGCT CGGCATGACC
GTCACCGTTG CGCCGCTCAC GACGACCGTG ATGACCTCGG TGTCCGCCGC CCGCACGGGT
GTCGCTTCGG GCATCAATAA CGCGGTGGCG CGGGTGGCGA GCCTGCTGGC GATCGCGGTG
CTGGGCATCG TGTTCGTGTG GTCGCACGAC GCGGCACTCC ATGCGCGGCT CGATGCGCTG
CATGTGCCGC AGGCAGCACG CGACGCGGCG AGCCTGGCGC AGATCGGCAT GGATACGGGC
TCGGCGTCGC CGGCCACCGG GACCAGTGCG TCGAAAGCGA AAACGGGCGC GGCGGATCTG
ACCGCGGCGC ACACCGAATC CGACGCGGCT CCAACAAACG TGGATACGGC GCGAGCGCAG
CCCGAGATGA CGCGGGCACA AGCCGACGCC CTCGGCGCGG CATTGCGCGC GGTGGCGCTG
GTGTCGGCGT TATGCGCGCT GGCTGGTGCA GCGCTGGCGT TTTTGACGAT CCGCTCGCAA
CCGCCGGTGT AG
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| Protein sequence | MADPHAPALE RRSSSVLPAQ ASPCDALVIR AQPLSSVHPC RRKKLALAAT ILGSSMAFID
GSVVNVALPS IQSELGASVA AIQWVVDAYL LFLGALVLVG GSLGDKLGRR TVFIAGIGLF
TLASIGCGLA PGAAALIAAR AVQGVGAALL VPSSLSIIGA VFDDKERGQA IGTWAGVGAI
TSALGPVAGG WLVDAFSWPA IFFLNVPIAC ATVALAVMAV PDSRQDDEGN SSTLAGGTTG
HAAARLDWPG AATATAGLAA LTYGLTLASA RGFGNRWVLA SILGGLLVLI AFVALEARTR
NPMMPLDVFR SRDFVGANLV TLLLYFGLGG ALFFLPFTLI RAYGYSATQA GAALLPVPVT
IGLLSRFTGG LTSRYGARAL LTAGPVVAAA GFAMLALPWV RGDYWRGFLP ALTVLGLGMT
VTVAPLTTTV MTSVSAARTG VASGINNAVA RVASLLAIAV LGIVFVWSHD AALHARLDAL
HVPQAARDAA SLAQIGMDTG SASPATGTSA SKAKTGAADL TAAHTESDAA PTNVDTARAQ
PEMTRAQADA LGAALRAVAL VSALCALAGA ALAFLTIRSQ PPV
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