| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5415 |
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| Symbol | |
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| ID | 6277634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1608707 |
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| End bp | 1609909 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616500 |
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| Product | putative pilus assembly protein CpaE |
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| Protein accession | YP_001889143 |
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| Protein GI | 187920112 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.677739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA TCTTCCTGAT TTCATCCAGC ATGGAGCGTG CGCCGCAAAT CGTCGCTCGC
CTCGAGGCAA GTGGTGTGGC CTACCGGTTG CGGACCGCTC ACGGCACGGC CCGGCAAGTG
CGGGCGCACG ACCGTGCGAT TCGAAGCGCC GATATGCTCA TCGTCGACGA CGCCGATCTG
GGCACGCGCG ATCTGGACGG CGTCGAGGAA GCGCTGGCCT GCACGCCGGC CCTGCATTGC
GTGCTGATGA CAGCGGCGCC GTCCACTGCT TTGCTGGGCG TGGCGATGCG CGTCGGCGTG
CGGCATGTGC TGTCGTGGCC TGTCGACGCC GACGAGATCA CCACCATACT CATTCAGGCC
GACGCGCGGA AAAACGCCAC CAGCCGCCGC GCCGGCCGCG TGGTTTCGCT TGCTTCGAGC
AAGGGCGGCA GCGGCACCAC GCTGATCGCC GTGAATCTCG CGTATTCGCT CGCCGCGCTG
AGCAACCGGC GTGTGCTGCT GATCGACCTG AGCCAGCAAT TCGGCGACGC CAGTCTGCTC
ATGGCGGACA AACCGCCGCC CACCACGCTT GCCGATCTCT GCTCCCAGGC GGAGCGTCTC
GACGCCGCGC TACTCGAATC ATGCGTGATG CACGTCCACG CAAATCTCGA TGTGCTGGCG
GGCGCGGGCG ATCCGCTCAA GGCCGCCGAA CTGCTGCCCG CGCAGTTGGA GCGCATTCTC
GCGCTCGCGC GCGAGCGCTA TGACGCGGTG CTGATCGACG TCGGGCAGAG CCTGAATCCG
ATGACGATCC ACGCGCTCGA TCGCAGCGAC GCGATCTGCA TGGTGGTGCG TCAGAACCTG
CTCTACCTGC ACGGCGGGCG CCGCATGCTG GATATTTTCA GGGAACTGGG CTATCCGGCC
AGCAAGGTGC GGGTGGTGGT GAATCACTAC GACAAGAACG CCCAGATCAA CCTGTCGAAG
CTCGAACAGA CGCTTGGCGC GAAGGTGGCG CATCAGCTTC CGCGCGACGA CAAACAGGCC
AACGACGCGC TCAGCCGCGG TGTGCCGCTG GTGACGTCGG CGAGAGACAG CACGCTTGCA
CAAGGCATCA GTCTGCTGGC TGACATGCTG TGGCCGTGCA GCGCCGAGCG CCGCAAAGGC
GTGCTCGGCC GGCTGTTCGC CTCGCGGCCG AACGTGCCGC CGCAGCTCAA GCCGGGGCAT
TGA
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| Protein sequence | MIDIFLISSS MERAPQIVAR LEASGVAYRL RTAHGTARQV RAHDRAIRSA DMLIVDDADL
GTRDLDGVEE ALACTPALHC VLMTAAPSTA LLGVAMRVGV RHVLSWPVDA DEITTILIQA
DARKNATSRR AGRVVSLASS KGGSGTTLIA VNLAYSLAAL SNRRVLLIDL SQQFGDASLL
MADKPPPTTL ADLCSQAERL DAALLESCVM HVHANLDVLA GAGDPLKAAE LLPAQLERIL
ALARERYDAV LIDVGQSLNP MTIHALDRSD AICMVVRQNL LYLHGGRRML DIFRELGYPA
SKVRVVVNHY DKNAQINLSK LEQTLGAKVA HQLPRDDKQA NDALSRGVPL VTSARDSTLA
QGISLLADML WPCSAERRKG VLGRLFASRP NVPPQLKPGH
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