Gene Bphyt_5414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5414 
Symbol 
ID6278389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1607806 
End bp1608543 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID642616499 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001889142 
Protein GI187920111 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.596503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGGA CCACTCCGCC GCCGGAGCGT CATGGCGAGC ATTGTCCTGC GAAAAAGAAG 
AGCGGTGAAA CGGAGAGTGT GGCGGATCGC GTCGACGCGC TGCCGCGCGC GATCACGGCG
AGCGGCATGC GCGCGGCTTC GGTGGAAGTG CTCGCGCGTT GCGCCGCCGC GCTTATGTTC
AGTCTCTTCG CCTATGCGGC GATCAAGCGC TGGCAGCAAG AGCCGAATCG CATCACCTTG
TTGCTGCTGG TGGTGGGCGC GTTCGTCACG CTAGGCTTGT CGCTGTTTGC GCGCGTGCCG
ATGCAGCGCG ACTGGACGCC GTTCGCTTTC ATTTGCGCGG TAGGCGGCAC GTTCTATTTT
CTGGCTGTGC GGCTCGCACC CGGCGTTCAT CTGGTTCCCG AAATGGCCGG CGCGGCGCTG
CAGGTGTTCG GCATTTTCTG GGAGTTGTTC GCCAAGGCCT CGTTGCGCAG GTCGTTCGGT
ATCTTGCCCG CCAATCGCGG CGTGGTGTCT CGCGGCGCGT ACCGCTTCGT GCGTCATCCC
ATGTATCTGG GCTACTTCGT GATGGACATC GGTTTTTTGC TGGTGAACTT CGGGATTCAG
AACATGATCG TGTATGGATG CCAGTTCGCC TTGCAGGTGG GCCGCATCTT GCGCGAAGAA
AAGCTGTTGT CCGACGACGA GAGCTATCGC GCCTATCGAA GCAAGGTGCG GTTTCGCGTG
ATTCCCGGCG TGTTTTGA
 
Protein sequence
MTWTTPPPER HGEHCPAKKK SGETESVADR VDALPRAITA SGMRAASVEV LARCAAALMF 
SLFAYAAIKR WQQEPNRITL LLLVVGAFVT LGLSLFARVP MQRDWTPFAF ICAVGGTFYF
LAVRLAPGVH LVPEMAGAAL QVFGIFWELF AKASLRRSFG ILPANRGVVS RGAYRFVRHP
MYLGYFVMDI GFLLVNFGIQ NMIVYGCQFA LQVGRILREE KLLSDDESYR AYRSKVRFRV
IPGVF