| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5402 |
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| Symbol | |
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| ID | 6278883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1593063 |
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| End bp | 1594655 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642616487 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_001889130 |
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| Protein GI | 187920099 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000100097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.196114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATG CCAATCTCAA GACTCAATTG AAAACGTACC TCGAAAAGGT TAGCAGGCCT
ATCGAGATCG TCGCGTCGCT CGACGACAGC GCAAAATCGC AAGAGCTGCT GGCATTGCTG
AACGATATCG CGACGTTGTC GGAGCGCGTC AACGTGATCG AGCGTCGTGG CGACGCCGAG
CGTAAGCCGT CGTTTTCGAT CGGCGAGCCG GGCAAGGACA CGGGCATCCG TTTCGCCGGC
ATTCCGATGG GTCATGAATT CACGTCGCTC GTGCTTGCGT TGTTGCAGGT GGGCGGTCAT
CCGGTCAAGC TCGAAGATGC CGTGATCGAA CAGATCCGCA ACCTCGACGG CGACTATCAA
TTCGAAACGT ATTTTTCGCT GTCATGCCAG AACTGCCCGG AAGTCGTCCA GGCACTGAAC
GTGATGGCGC TGATCAACCC GCGCATCCGC CACGTCGCGA TCGACGGCGC GCTGTTCCAG
AACGAAGTCG AAGCGCGCCA GATCATGGCG GTACCGACCA TGTTCATGAA CGGCGAAGTG
TTCGGCCAGG GTCGCAGCGG CGTGAAGGAA ATCCTCGCGA AGCTCGATAC CAACGCCGGT
GCGCGCGCCG CGAAGGAACT GGAAAAGAAG CCAGTGTTCG ATACGCTGAT CGTCGGCGGC
GGCCCTGCGG GCGCGGCTGC GGCGATCTAC TCGGCGCGCA AGGGTATCGC GACGGGCGTG
GTGGCGGAGC GCTTCGGCGG TCAGGTGCTG GACACGCTGG CCATAGAAAA CTTCGTCTCC
GTGACGGAAA CCGAAGGACC GAAGTTCGCC ACGGCGCTCG AGCAGCACGT GAAGACTTAT
GAAGTCGACA TCATGGACGT GCAGCGTGCT GAGGCGCTGA TCCCGGGCCG CATCAACGAA
GTGCGTCTGG CAAACGGCGC GGTGCTCAAG GCCAAAACGA TCATTCTGGC GACGGGCGCA
CGCTGGCGCG AAATCAACGT GCCGGGCGAG CGCGAGTACC GTAATCATGG CGTCGCGTAC
TGCCCGCACT GCGACGGTCC GTTGTTCAAG GGCAAGCGCG TCGCGGTGAT CGGTGGCGGC
AATTCCGGTG TCGAAGCGGC GATCGATCTG GCGGGTATCG TGCGCGAAGT GACGCTGTTC
GAGTTCGGCG CCACGCTGCG CGCTGACGAA GTGCTGCAAC GCAAGCTGCG CAGCCTCGCG
AATGTGACCG TCGTCACGCA AGCCCAAACC ACGGAAATCA CCGGCGACGG CAAGAAGGTC
AACGGTCTGG TCTACAAGGA TCTGCGTTCG GGCGAAGTGA AGCAGATCGA ACTGGAAGGC
GTGTTCGTGC AGATCGGTCT CGTGCCGAAC ACGGAATGGC TCAAGGGCAC GGTCGAGTTG
TCGAAGCACG GCGAGATCGT CGTGGATGCG CGCGGCGCGA CGTCGGTGCC GGGCGTGTTC
GCCGCCGGCG ACGTGACCAC GGTACCGTTC AAGCAGATCG TGATCGCCGT GGGCGAAGGC
GCGAAGGCAT CGCTTTCCGC GTTCGATCAC CTGATCCGTA ATAGTGAAGA AGTGGAAGTG
GTTGGTGAAG CTGAGGTTGC AGTAGCGGTT TGA
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| Protein sequence | MLDANLKTQL KTYLEKVSRP IEIVASLDDS AKSQELLALL NDIATLSERV NVIERRGDAE
RKPSFSIGEP GKDTGIRFAG IPMGHEFTSL VLALLQVGGH PVKLEDAVIE QIRNLDGDYQ
FETYFSLSCQ NCPEVVQALN VMALINPRIR HVAIDGALFQ NEVEARQIMA VPTMFMNGEV
FGQGRSGVKE ILAKLDTNAG ARAAKELEKK PVFDTLIVGG GPAGAAAAIY SARKGIATGV
VAERFGGQVL DTLAIENFVS VTETEGPKFA TALEQHVKTY EVDIMDVQRA EALIPGRINE
VRLANGAVLK AKTIILATGA RWREINVPGE REYRNHGVAY CPHCDGPLFK GKRVAVIGGG
NSGVEAAIDL AGIVREVTLF EFGATLRADE VLQRKLRSLA NVTVVTQAQT TEITGDGKKV
NGLVYKDLRS GEVKQIELEG VFVQIGLVPN TEWLKGTVEL SKHGEIVVDA RGATSVPGVF
AAGDVTTVPF KQIVIAVGEG AKASLSAFDH LIRNSEEVEV VGEAEVAVAV
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