Gene Bphyt_5401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5401 
Symbol 
ID6280150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1591619 
End bp1592773 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content62% 
IMG OID642616486 
ProductAlkane 1-monooxygenase 
Protein accessionYP_001889129 
Protein GI187920098 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0125234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.126955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAT CGCAAGCGGC CCCCGCGCGC TGGGTCGACG GCAAGCGCTA TCTATGGCTG 
CTCGGCGCAC TAACAATCAC CCTGCCGCTG CACGCCGCAA ACTTTGCCCT GCAAACCGGC
TGGCACATTT TCTGGTGGTT CGGCCCGATC TTCGTGTTCG GCATCATTCC GGTACTCGAC
CACCTGATCG GCGACGACCC CGGCAATCCG CCAGAGCACA TCGTCTCCAC GCTCGAAAAA
GAGCGCTATT ACCGCCGCGT CGTGTATCTC GCCACGTTTA TCGAATATGT GTCGTTCTTT
GGCGCACTAT GGATCGTGGG CACGCATGCA ATGACGTGGT ACGACTACGT GGGCTTTGCG
CTCTCGCTCG GCGCGGCGAC CGGCGTGTCG ATCAACACGG CGCACGAACT CGGTCACAAG
ACGGACCGCT TCGAGCGCTG GCTCGCCAAA ATCACGCTGG CGCCGGTCGC TTACGGCCAC
TTCTTCGTCG AACACAATCG CGGGCATCAC GTGCGGGTAG CGACGCCGCA CGATCCGGCC
AGCGCGCGCT ACGGCGAATC GTTCTGGGCC TTTTTGCCGC GCACGGTACT CGGCAGCATC
GCGTCCGCAT GGCGGCTCGA AAAGCAGCGC CTGACGCGCC TCGGCAAGTC GCCGTGGACG
TGGCGCAACG AGGTTCTGCA TGCGTGGGCC ATGACCGTGG CGTTATGGGG CGCCATGATC
GCGCTGTACG GCAAGACCGT GGTTCCGTTC CTGCTGATCC AGGCGGTGTA CGGTGCGTCG
CTACTGGAAG TGGTCAACTA TCTGGAGCAC TACGGTCTCG GCCGCAAACA ACTCGCGAGC
GGCCGTTACG AGCGTTGCCA GCCGCAGCAT TCGTGGAACA GCAATCGCAT CGTGACCAAT
CTCTTTCTGT ATCAGCTGCA GCGTCACGCC GATCATCACG CGAATCCGAC GCGTTCGTAT
CAGGCGCTGC GTCACTTTGA CGGCGCGCCG CAACTGCCGT CGGGTTATGC CACGATGATC
ATGCTCGCGT ACGTGCCGCC GCTCTGGTTT CGCGTGATGA ATCCGCGCGT CGTCGCACAC
TATCGTGGCG ACATGGCGCA GTCGAATATT CGACCTGCCA TTCGCGAGCG CGTCCTCGCG
AAGTTCGCGG GTTAG
 
Protein sequence
MATSQAAPAR WVDGKRYLWL LGALTITLPL HAANFALQTG WHIFWWFGPI FVFGIIPVLD 
HLIGDDPGNP PEHIVSTLEK ERYYRRVVYL ATFIEYVSFF GALWIVGTHA MTWYDYVGFA
LSLGAATGVS INTAHELGHK TDRFERWLAK ITLAPVAYGH FFVEHNRGHH VRVATPHDPA
SARYGESFWA FLPRTVLGSI ASAWRLEKQR LTRLGKSPWT WRNEVLHAWA MTVALWGAMI
ALYGKTVVPF LLIQAVYGAS LLEVVNYLEH YGLGRKQLAS GRYERCQPQH SWNSNRIVTN
LFLYQLQRHA DHHANPTRSY QALRHFDGAP QLPSGYATMI MLAYVPPLWF RVMNPRVVAH
YRGDMAQSNI RPAIRERVLA KFAG