Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5401 |
Symbol | |
ID | 6280150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1591619 |
End bp | 1592773 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616486 |
Product | Alkane 1-monooxygenase |
Protein accession | YP_001889129 |
Protein GI | 187920098 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0125234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.126955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACAT CGCAAGCGGC CCCCGCGCGC TGGGTCGACG GCAAGCGCTA TCTATGGCTG CTCGGCGCAC TAACAATCAC CCTGCCGCTG CACGCCGCAA ACTTTGCCCT GCAAACCGGC TGGCACATTT TCTGGTGGTT CGGCCCGATC TTCGTGTTCG GCATCATTCC GGTACTCGAC CACCTGATCG GCGACGACCC CGGCAATCCG CCAGAGCACA TCGTCTCCAC GCTCGAAAAA GAGCGCTATT ACCGCCGCGT CGTGTATCTC GCCACGTTTA TCGAATATGT GTCGTTCTTT GGCGCACTAT GGATCGTGGG CACGCATGCA ATGACGTGGT ACGACTACGT GGGCTTTGCG CTCTCGCTCG GCGCGGCGAC CGGCGTGTCG ATCAACACGG CGCACGAACT CGGTCACAAG ACGGACCGCT TCGAGCGCTG GCTCGCCAAA ATCACGCTGG CGCCGGTCGC TTACGGCCAC TTCTTCGTCG AACACAATCG CGGGCATCAC GTGCGGGTAG CGACGCCGCA CGATCCGGCC AGCGCGCGCT ACGGCGAATC GTTCTGGGCC TTTTTGCCGC GCACGGTACT CGGCAGCATC GCGTCCGCAT GGCGGCTCGA AAAGCAGCGC CTGACGCGCC TCGGCAAGTC GCCGTGGACG TGGCGCAACG AGGTTCTGCA TGCGTGGGCC ATGACCGTGG CGTTATGGGG CGCCATGATC GCGCTGTACG GCAAGACCGT GGTTCCGTTC CTGCTGATCC AGGCGGTGTA CGGTGCGTCG CTACTGGAAG TGGTCAACTA TCTGGAGCAC TACGGTCTCG GCCGCAAACA ACTCGCGAGC GGCCGTTACG AGCGTTGCCA GCCGCAGCAT TCGTGGAACA GCAATCGCAT CGTGACCAAT CTCTTTCTGT ATCAGCTGCA GCGTCACGCC GATCATCACG CGAATCCGAC GCGTTCGTAT CAGGCGCTGC GTCACTTTGA CGGCGCGCCG CAACTGCCGT CGGGTTATGC CACGATGATC ATGCTCGCGT ACGTGCCGCC GCTCTGGTTT CGCGTGATGA ATCCGCGCGT CGTCGCACAC TATCGTGGCG ACATGGCGCA GTCGAATATT CGACCTGCCA TTCGCGAGCG CGTCCTCGCG AAGTTCGCGG GTTAG
|
Protein sequence | MATSQAAPAR WVDGKRYLWL LGALTITLPL HAANFALQTG WHIFWWFGPI FVFGIIPVLD HLIGDDPGNP PEHIVSTLEK ERYYRRVVYL ATFIEYVSFF GALWIVGTHA MTWYDYVGFA LSLGAATGVS INTAHELGHK TDRFERWLAK ITLAPVAYGH FFVEHNRGHH VRVATPHDPA SARYGESFWA FLPRTVLGSI ASAWRLEKQR LTRLGKSPWT WRNEVLHAWA MTVALWGAMI ALYGKTVVPF LLIQAVYGAS LLEVVNYLEH YGLGRKQLAS GRYERCQPQH SWNSNRIVTN LFLYQLQRHA DHHANPTRSY QALRHFDGAP QLPSGYATMI MLAYVPPLWF RVMNPRVVAH YRGDMAQSNI RPAIRERVLA KFAG
|
| |