Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5398 |
Symbol | |
ID | 6279013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1589300 |
End bp | 1590187 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616483 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001889126 |
Protein GI | 187920095 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.187721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0384441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCG ATGACATGCG GATTTTCGTC GCCACCGTCG ACGCGCATAA CTTCACGGCC GCCGCCAACC GTCTGTCGCT GTCGAAGCAG TTCGTGAGCC GCCGGGTGAT GGCGCTGGAG GAAACGCTCG GCGTGCAGTT GCTGATCCGC AATACGCGCA AGCTCGCGGT GACCGATCTC GGCCAGGAGT TTTACGAGCG CGCCAAACGT ATCCTCGGTG AAGTGGAAGA CGCCGAGCAG GCCATGTCGC TGCGGCGCGC CGGGCCGCGC GGACTGCTGC GCGTGAGCGC GCCGATGTCG TTCGGCATGG CGCATCTGTC GCCGCTGGTG GCGATGTTTT TGCGTGAGCA CGGCGACGTG CGCTTCGAGA TGGAATTGAG CGATCGCACG GTGGATGTGG TCGGCGAAGG CTTCGACATG GCGATCCGGA TCGGCAGCTT GCCGGATTCC ACGCTGATCG GGCAGAAGCT CGTGGATATC CGGATGGTGG CCTGCTGCAG TCCCGGTTAT GTGCGGCGGC GTGGCGCGCC CAAGGTGCCC GGCGATCTGG AGCGCCATTC GTGCCTGTTA TACGGGCACG GCGGCGCGGT GAGCTGGGAG TTTGTCGTCG ATGGCGTGAC GAAAGGCGTC GAGGTCCACG GGCCGTTGCG CGCCAACAAT GGCGAACTGG TGCGCGATGC GGCCGTCGCG GGCCTGGGGA TTGTTCGGCT TCCTGACTTT ATCGTCGCCG ACGCGCTCAA AAGCGGCCAG CTCGTGCCAG TGCTCGAAGC ATTCCTGCCC AGCGCGACGA GCGTCTACGC GGTGTATCCG CAGCACAGGC AAAGCTCCCT CACGATCCGG GCGTTCGTGG AATTCCTGAG GGAGCATTTG AGCAAGCGGC TGGTTTAG
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Protein sequence | MQLDDMRIFV ATVDAHNFTA AANRLSLSKQ FVSRRVMALE ETLGVQLLIR NTRKLAVTDL GQEFYERAKR ILGEVEDAEQ AMSLRRAGPR GLLRVSAPMS FGMAHLSPLV AMFLREHGDV RFEMELSDRT VDVVGEGFDM AIRIGSLPDS TLIGQKLVDI RMVACCSPGY VRRRGAPKVP GDLERHSCLL YGHGGAVSWE FVVDGVTKGV EVHGPLRANN GELVRDAAVA GLGIVRLPDF IVADALKSGQ LVPVLEAFLP SATSVYAVYP QHRQSSLTIR AFVEFLREHL SKRLV
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