| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5392 |
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| Symbol | katE |
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| ID | 6279023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1582546 |
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| End bp | 1584678 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642616477 |
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| Product | hydroperoxidase II |
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| Protein accession | YP_001889120 |
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| Protein GI | 187920089 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase
[COG0753] Catalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0123509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGTA AAACGACTAC GCAGAAGCCC GCAGCGAAGA ACGCGCAGGC GAGTAACCCG
CAAGCCCCGC AAGCCGATCC GAAGTCGAAG GATCTCGAAC AGTTTCGAGT CAGTCCGGAA
GGCCAGGCGC TGAGAACCAA TCAGGGCGTC AAGATCTCCG ACAATCAGAA CAGCCTGCGC
GCCGGTCCAC GCGGCCCCTC GCTGCTCGAA GATTTCATCA TGCGTGAGAA GATCACGCAC
TTCGACCACG AACGCATTCC GGAGCGCATC GTGCATGCGC GCGGTTCGGC GGCGCACGGC
GTGTTTCAGG TGTACGAGTC GATGAAGGAA TACACCAAGG CCGCGTTCCT GCAGGACCCC
GCTGTGCAGA CGCCGGTTTA TGTGCGCTTT TCCACGGTGC AGGGTCCGCG CGGTTCCGCC
GACACGGTGC GCGACGTGCG CGGCTTCGCC GTGAAGTTCT ACACGCAGGA AGGCAATTAC
GATCTGGTCG GCAACAACAT GCCGGTGTTT TTTATTCAGG ACGCCATCAA GTTTCCCGAC
TTCGTCCACG CGGTCAAACC GGAAGCCCCG AACGAAATGC CGACCGGCGG CTCCGCGCAC
GACACTTTCT GGGACTTCGT CTCGCTGGTG CCCGAGTCCG CGCATATGGT GCTGTGGACC
ATGTCGGACC GCGCGATTCC GCGCAGCCTG CGCACCATGG AAGGTTTCGG CATTCACACG
TTCCGTTTCG TGAATGCGCA AGGCAAGGGA CGCTTCGTCA AATTCCACTG GCGCCCGGTG
CTGGGCTCGT ACTCGCTGCT GTGGGACGAA GCGCAGAAAC TGGCCGGCAA GGATCCGGAC
TTTCATCGAC GCGATCTGTG GGAGTCGATC GAATCAGGCA ACTTCCCCGA GTTCGAACTC
GGCGTGCAGA TCATTGAAGA AGCCGACGAA CATAAATTCG ATTTCGACCT GCTCGATCCG
ACCAAGCTGA TTCCGGAAGA ACTCGTGCCG GTGAAGATCA TCGGCAAGAT GACGCTCAAT
CGCAACCCGG ACAACTTCTT TGCCGAGACC GAACAGGTGG CGTTCCATCC GGGGCATATC
GTGCCGGGCA TCGATTTCTC GAACGATCCG CTGTTGCAAG GCCGTTTGTT CTCGTACACG
GATACACAGA TCAGCCGGCT GGGCGGCCCG AACTTCCACG AAATTCCGAT CAACCGGCCG
GTGTGCCCGT TCAGTAACAA CCAGCGCGAT GCGATGCACC GCCAGACGAT CAATGTCGGC
CAGGCCTCGT ATGAGCCGAA TTCGCTGAGC GGCGGCTGGC CGAAGGAAAC CGATCCGGCG
CCGTCCGACG GCGGCTTCGA AAGTTATCAG GAGCGTGTGG AAGGCACCAA GATACGTGTG
CGCAGCGAAT CGTTCGCCGA TCATTTCTCG CAGGCCGCGT TGTTCTATAA CAGCATGTCG
CAGCCTGAGA AAGACCACAT CGCCGCGGCC TATCAGTTCG AACTCGGCAA GGTGACGAAG
CCCGAGATTC GCGCGCGCGT GGTGAACGAG ATTCTCGCCA ACTTCGACGC GGGACTCGCG
GCGCAGGTAG CCGAAGGGCT TGGATTGCCG GCGCCGAAGA AAGGCACCGC GAAGCTGACC
GGCCCCAAGG AATCGCGCGC GCTGAGCTTG CTAAACCGCG TGCAGCCGGG CATCAAGACG
CGCAAGATCG CGCTGCTCGC CGCGCCGGGT TCGGATGGCG CCGCCATCAA GAAGCTTCAG
CAGGCGCTGC AAGGCGAGGG CGCGGTGCCC ATGCTGATCG CGCCGACGCT CGCCGCGATC
GACGGCATGG CGCCGGACGC CACGATTGCC GGCTTGCCGT CGATCATGTT CGACGCGGTG
ATCGTGGTGG GCGGCGACAA GGGCGCGAAG ATGCTGGCGC AATCCGGCGA CGCGCGGCAT
TTCGTGCTCG AGGCGTTCAA ACATCTGAAG GCGATCGCGG CGATCGGCGC GGGACGTGAC
GTGCTCACTG CCGCGCACTT GCCCGACCAC GCCGACGGTG TTGCCACCGG CGATGACAAG
CAGGCCGCCG ATGTGCTGAA GGCCTTCATC AAGGCGGCCG GGCAGCATCG CGTGTGGTCG
CGGGCGAAGC AGGCTGAGAC CGTGCCGGCT TGA
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| Protein sequence | MAGKTTTQKP AAKNAQASNP QAPQADPKSK DLEQFRVSPE GQALRTNQGV KISDNQNSLR
AGPRGPSLLE DFIMREKITH FDHERIPERI VHARGSAAHG VFQVYESMKE YTKAAFLQDP
AVQTPVYVRF STVQGPRGSA DTVRDVRGFA VKFYTQEGNY DLVGNNMPVF FIQDAIKFPD
FVHAVKPEAP NEMPTGGSAH DTFWDFVSLV PESAHMVLWT MSDRAIPRSL RTMEGFGIHT
FRFVNAQGKG RFVKFHWRPV LGSYSLLWDE AQKLAGKDPD FHRRDLWESI ESGNFPEFEL
GVQIIEEADE HKFDFDLLDP TKLIPEELVP VKIIGKMTLN RNPDNFFAET EQVAFHPGHI
VPGIDFSNDP LLQGRLFSYT DTQISRLGGP NFHEIPINRP VCPFSNNQRD AMHRQTINVG
QASYEPNSLS GGWPKETDPA PSDGGFESYQ ERVEGTKIRV RSESFADHFS QAALFYNSMS
QPEKDHIAAA YQFELGKVTK PEIRARVVNE ILANFDAGLA AQVAEGLGLP APKKGTAKLT
GPKESRALSL LNRVQPGIKT RKIALLAAPG SDGAAIKKLQ QALQGEGAVP MLIAPTLAAI
DGMAPDATIA GLPSIMFDAV IVVGGDKGAK MLAQSGDARH FVLEAFKHLK AIAAIGAGRD
VLTAAHLPDH ADGVATGDDK QAADVLKAFI KAAGQHRVWS RAKQAETVPA
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