| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5385 |
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| Symbol | |
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| ID | 6278841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1573638 |
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| End bp | 1574579 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642616471 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_001889114 |
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| Protein GI | 187920083 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.121363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTCA CACGCGTCAC CATCCGTCAG TTCGAAGCGT TTCTCGCCAT CGTCGATCTG
CATAGCATCG GCGCGGCGGC GGACCGGCTC GGGCTGACTT CGTCGGCGGT CAGCCAGTTG
CTCGCCGACC TTGAAACGGA ACTCGGCTTC CGCCTCTTCG ACCGGACCAC GCGGCGAGTG
AATCTGTCGA GCGCGGGGCA GGATTTTCTG GCGTCGGCGG AATCGGTGTT GCGGCACGTG
CGTGCCGCCG CGCAATCCGC CGACGATATC CGCAACCGCG CCGCCGGCAT CGTGCGGATC
GGCGCGCCGC TAGTGCTGGC GGCGACCGCG CTGCCCGCGG CCATCGCCGA ATATGCGCGC
GACAAGCCGA AGGTGGTCGT GCGCATTTGC GATACCGTGG TCGAGCAGTT GGTAGAGCGC
GTGGAAAGCG GCGACGTGGA TCTCGCGATC GGCCCTGACC GGCCAAGCGG CACGCGCGTG
CGTTGCGACC CGGCGTTCGC GAGCCCGTGG GTAATGTGGT GCGCGCCGAC CCATCCGTTG
AACGCGCGCC GCCGCGTGCA GTGGCAGCAC TTGCGCGACG TGCCGATCGT CGCCACCGGC
CGCGACCACG AACGCGCGGT CGGGCAGATG CTGGCCAATC TGCCGGCGGA AGCCCGCATC
ATTCCCGTAG ACGTGGTGGA CAACGTCACC ACGGCGTTCG GCCTCGCCTC ACAAGGGCTG
GCCATCACGC TCGCGCCCGC CTACGTCGCG CCGTTGGCGC GCACCTTCGG GCTGGTGATG
AAGCGCATTG TCGATCCCGA AACGATCCGC GAGGTGTGCG TGTATCGCTC GACCGAGCGC
GCGCTGTCGC CGCCCGCCGA CGGTTTCGCA GATTTCATCA TGCCGTGGTT AAAGCGCTGG
GATCGCGAGA CGCAGGCGGA GGCACGGGGC AAGCGCACGT GA
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| Protein sequence | MPLTRVTIRQ FEAFLAIVDL HSIGAAADRL GLTSSAVSQL LADLETELGF RLFDRTTRRV
NLSSAGQDFL ASAESVLRHV RAAAQSADDI RNRAAGIVRI GAPLVLAATA LPAAIAEYAR
DKPKVVVRIC DTVVEQLVER VESGDVDLAI GPDRPSGTRV RCDPAFASPW VMWCAPTHPL
NARRRVQWQH LRDVPIVATG RDHERAVGQM LANLPAEARI IPVDVVDNVT TAFGLASQGL
AITLAPAYVA PLARTFGLVM KRIVDPETIR EVCVYRSTER ALSPPADGFA DFIMPWLKRW
DRETQAEARG KRT
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