| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5362 |
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| Symbol | |
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| ID | 6280184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1545539 |
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| End bp | 1546639 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642616448 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_001889091 |
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| Protein GI | 187920060 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.142467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCA ACACGATAAA ACCGCTTCTG GCCGCCTTGC TGCTCGGCGC ATTCAGTGCC
GCCTCGCTCG CCGACGAAAA ACAGCTCAAC CTGTACAACT GGGCTGACTA CATCGCGAAA
GACACCGTGC CGAACTTCGA AAAAGAGTCC GGCATTCACG TGCGCTACGA CGTGTACGAC
GGCGACGAAA CCTTGCAGGC GAAACTGCTG ACCGGCTCGA CCGGCTACGA CGTGGTAGTG
CCGACCTCGA ACTTTCTCGC CAAACAGATC GAAGCCGGCA TCTATCAGAA GCTCGACAAA
TCGAAGCTGC CGAATCTCGC GAACCTCGAC CGCAATCTGC TGAAGCTGGT TGCCGACGCG
GACCCCGGCA ATCAGTACGC GGTGCCGTGG GCGTGGGGCA CGACGGGGCT CGGCTACAAC
GTGACCCGCG TGAAGAAGAT TCTCGGCAAC GAAGCGCCGC TCGATAACTG GGACATCCTG
TTCAAGCCCG AGTACCTGAG CAAGCTGAAG AGTTGCGGCG TCTCCGTGCT CGATGCGCCG
TCCGATGTGT TCGCGGTCAC GCTGCACTAT CTCGGCCGCG ATCCGAACAG CGAGAATCCC
GCCGACTATC AGGCCGCGTA CGACGCGCTA AAAAAGATCC GCCCGTATAT CACGCAATTC
AACGCGACGA GCTACATCAA CGATCTCGCG GGCGACGATA TCTGCTTCGC GCTGAGCTGG
TCGGGCGATG TCTCGATGGC GAGCCATCGC GCGCGAGAAG CCGGCAAGAG CTACGAGGTC
AAGTACTTCA TTCCGGAAGG CGGCGCGCCG GTGTGGTTCG ACATGATGGC GATCCCGAAA
GATGCGCCGC ATCCGGAAGC GGCGCTCAAC TGGATCAACT ATATCGAGCG CCCCGAAGTG
CACGCGGACA TCACCAACAC CGTGTTCTAT CCGAACGCGG ATGCCGCCGC GCGCAAATTC
GTGCGGCCCG AAATTCTCAA CGACCCGACC GTGTATCCGC CTGAGCCCGT GCTGAAGACA
TTGTTTCTGC TCAAGCCTTT GCCCGCGCAG ATCAAGCGCC TGGAAGGCCG CTTGTGGGCG
CAGTTGAAAT CAGGTTCGTG A
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| Protein sequence | MPRNTIKPLL AALLLGAFSA ASLADEKQLN LYNWADYIAK DTVPNFEKES GIHVRYDVYD
GDETLQAKLL TGSTGYDVVV PTSNFLAKQI EAGIYQKLDK SKLPNLANLD RNLLKLVADA
DPGNQYAVPW AWGTTGLGYN VTRVKKILGN EAPLDNWDIL FKPEYLSKLK SCGVSVLDAP
SDVFAVTLHY LGRDPNSENP ADYQAAYDAL KKIRPYITQF NATSYINDLA GDDICFALSW
SGDVSMASHR AREAGKSYEV KYFIPEGGAP VWFDMMAIPK DAPHPEAALN WINYIERPEV
HADITNTVFY PNADAAARKF VRPEILNDPT VYPPEPVLKT LFLLKPLPAQ IKRLEGRLWA
QLKSGS
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