| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5348 |
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| Symbol | |
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| ID | 6279657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1531646 |
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| End bp | 1532545 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616434 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_001889077 |
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| Protein GI | 187920046 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.581143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCA TCACCGCTGT CCGCACGAGC GCCGTGCCCC TGCGCAGCGT TGCGCTGATC
CTCGTGTCGA TGTTCTGTTT CGCGCTGGTC GATGCGCTCG CCAAATCCGT AACGCTCGCT
TATCCGGCCA ACGAAGTGAC GTTCTTTCGC ATGCTGTTCG GCCTGCTGCC GGCTGTCGCG
GTATGCCTGC GCGGCAAGCC GCTCGTCGAG CGGATCAGGC ACATGGACGT GCGCGGGCAG
ACCCTTCGCG CACTGACGTT GCTTGGCGCC TCAGGTCTCT TCTTCGCGGG TCTGCCGTAC
ATGCCGCTTA GCGAAGCAGT GGCGATCGTC TACTCGGAGA CCTTGCTGGT GATCGTACTC
GCGCCGCTGC TGCTGAAGGA GGCGTTGAAG CCGCGCGATG CGCTGGCTGC AGCGGTCGGC
TTTGTCGGCG TGCTGTTCGT GGTGCGTCCG GACGGCTCGC ATTCGAGTTG GCTCGGTCCT
GTCCTACTGA TGTCGAGCGC CTTCTTCGGC GCGCTGTCGA TCATTCAGAT CAAGCGCATT
CGCGCCTCGG ACGATTCGGG CACGACGGTG CTGTATTTCA CGGTGATCGG CACGATTGTC
ACTAGCGTTT CGCTGTTTTT CGCGTGGCGC GCGCCTACGC TCCAGGCGCT CGCGGTGATG
GCCTTGCTCG GCGGCTTCGC CACGGCCGGG CAATTGCTGA TGACCATGGC ATTTCGCCAG
GCCGACGCCG GCGCGCTCGC GCCGTATAAC TACACGAGCA TCGTGTGGGC GGCGCTGTTC
GGTTATGTGG CGTGGGGCGA AACGATCGGC GCCATGTCGC TGCTCGGCAT TGCATTGATT
GTGACCAGTT CGGTTGCCGT TGCGATGCGT GGAAAGCAGC AAGAAGGGCC GCTCGTATAG
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| Protein sequence | MPPITAVRTS AVPLRSVALI LVSMFCFALV DALAKSVTLA YPANEVTFFR MLFGLLPAVA
VCLRGKPLVE RIRHMDVRGQ TLRALTLLGA SGLFFAGLPY MPLSEAVAIV YSETLLVIVL
APLLLKEALK PRDALAAAVG FVGVLFVVRP DGSHSSWLGP VLLMSSAFFG ALSIIQIKRI
RASDDSGTTV LYFTVIGTIV TSVSLFFAWR APTLQALAVM ALLGGFATAG QLLMTMAFRQ
ADAGALAPYN YTSIVWAALF GYVAWGETIG AMSLLGIALI VTSSVAVAMR GKQQEGPLV
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