Gene Bphyt_5343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5343 
Symbol 
ID6280543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1527038 
End bp1528201 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content64% 
IMG OID642616429 
ProductEpoxide hydrolase domain protein 
Protein accessionYP_001889072 
Protein GI187920041 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAC AAGCATTTCA GATTGCAATC GACGATCGCG AGATCGAGGA TCTTCGCCGG 
CGTATTCGCG CGACCCGATG GGCGCCGGCG ACGCCGTCAC CGGCCTGGCA ACAGGGCGCC
GATGCCACAT GGCTGCGCGA ACTCGCTGAG TACTGGGCCG AGCGTTTCGA CTGGCGCGCG
GCCGAGCGCG GCTTGAATCG GCAGCCACAA TTTCTCGCCG ATGTGCAAGG GCAGCGCGTG
CATTTCGTCC ATCGGCGCGG TGCGGGGCCC GCACCGTATC CGCTTGTGAT CACCCATGGC
TGGCCCGGCT CGTTCTTCGA ATTTCATGCG CTGCTCGACC GCTTATGCGA CCCGGCCGCG
TCCGGCGGCG ATCCTGCCGA TGCCTTCGAT GTCGTCGTGC CGTCGCTGCC CGGCTTCGCG
TTTTCGCAGG CGCCCGTGCA ACCCGGCACA TCCGCGTGGC AAGTGGCCGA TTTGTGGGCC
TCGCTGATGC GAGGCCTCGG CTATGAGCGC TTCGGCGCGC AAGGCGGCGA TCTCGGCGCG
GGCGTGTCGA TCGCGCTCGC CGCGCGGCAT CCGCAAGCCG TCGACGGCAT TCATCTCAAC
TTCCTGCCAA GCTCGTATGA GCCGGCCATC GGCGCGGCGC AAAAGCCGCT TACGCCAGCC
GAAGAAAATT TCTTGCGCGA GAAAAACGAG TGGGCCGCGA AGGAGGGCGG CTACGCGCAC
ATGCACAGCA CCAAGCCGCA AACGCTCGCT GCGTCGCTTA ACGATTCGCC GGTGGGACTC
GCTGCATGGA TCGGTGAGAA GTTTCGCGCA TGGAGCGATT GCGAAGGCGA CGTGGAGCGT
GTGTTTTCGA AAGACGATCT GCTCACCAAC ATCTCGCTCT ACTGGTACAC GCAGTGCATC
GGCCCGGCGA TCCAGATGTA CTGGGAAAAC GGCTTGCAGC CGATGCGTTT CGCGGAAGGT
CAACGCGTCA CGCCGCCTGT CGGTTTCGCG CATTTTCCGA AGGAGATCAA TCACCCGCCG
CGCAGTTGGC TCGAAAGAAC GTTCGACGTC GTGCAGTGGG CCGACATGCC GGGCGGCGGA
CATTTCGCTG CAATGGAAAA ACCCGATCTG CTCGCCGGGG AAATTCGCCA GTTCTTCCGG
CCGCTGCGGC AGCAGCGGCG CTAG
 
Protein sequence
MQIQAFQIAI DDREIEDLRR RIRATRWAPA TPSPAWQQGA DATWLRELAE YWAERFDWRA 
AERGLNRQPQ FLADVQGQRV HFVHRRGAGP APYPLVITHG WPGSFFEFHA LLDRLCDPAA
SGGDPADAFD VVVPSLPGFA FSQAPVQPGT SAWQVADLWA SLMRGLGYER FGAQGGDLGA
GVSIALAARH PQAVDGIHLN FLPSSYEPAI GAAQKPLTPA EENFLREKNE WAAKEGGYAH
MHSTKPQTLA ASLNDSPVGL AAWIGEKFRA WSDCEGDVER VFSKDDLLTN ISLYWYTQCI
GPAIQMYWEN GLQPMRFAEG QRVTPPVGFA HFPKEINHPP RSWLERTFDV VQWADMPGGG
HFAAMEKPDL LAGEIRQFFR PLRQQRR