| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5342 |
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| Symbol | |
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| ID | 6278207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1525404 |
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| End bp | 1526768 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616428 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001889071 |
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| Protein GI | 187920040 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA CCAAGGCCAT TACGCGACGC GTCATCTACT TCACGCGCGA TCCCGCGCCA
GGATTGCTGG CGAGCTTTCG GGAGCGCGAG TGGGACGTCG AGGTCGTCGG CTCGGTGCGT
GAAGTCCGGC AATTCGCGCA AGGCGGCTCG CTGGCGGGCG GTCTCGTCGA TCTGTCCAGC
GTGTTCGAGC CAGGCGAGGC CGCCGCGCTG GAAACCTGTC TCGCCATGCC GAACATCGGC
TGGGTGGCGA TGGCGGCCGC CACGCACCTC GACGACGCGA TCCCGCGCCG CCTGGTGCGC
GACTACTGCT TCGACTACGT GACGCTCCCC GCTGCGAATG AGCGGATCGT CGACACCGTA
GGCCACGCCT GCGGCATGAT TTCACTCGGC GAGCCCGCCT GTCTCGACAC GTCCACCGCC
GAAGGCCAGA TGATCGGTAC GTGCGATGCC ATGTACGCGC TGTTCCGCGC GGTCCGCAAA
GTTGCGACGA CCAATGCGCC CGTTTTCATT TCCGGCGAAT CCGGCACCGG CAAGGAACTG
ACCGCGGCAG CGATTCACGC GCGTTCGCCT CGCCGCGACG CGCCGTTCGT CGCCATCAAT
TGCGGCGCGA TTCCCGCGCA ACTGCTGCAA TCCGAATTGT TCGGCTACGA GCGCGGTGCA
TTCACCGGTG CGAATCAGCG CCGGGTCGGT CGCGTCGAAG CGGCGAATGG CGGCACGCTG
TTTCTCGACG AAATCGGCGA TCTGCCGTTC GAGAGTCAGG CGAGCCTGCT GCGCTTTCTG
CAGGAGAGCA CCATCAGCCG GCTGGGTGGC GACGGTTCGA TCGATGTGGA CGTGCGCATC
ATCTCCGCGA CTCACGTCGA TATGGAAGCC GCGATCGAAG ACGGCCGCTT TCGCGCGGAC
CTGTACCACC GCCTGTGCGT GCTGAGGATC GACGAACCGC CGCTGCGCGC GCGCGGCAAG
GACATCGAAC TGCTCGCGCT CTACACGTTG GAGCGCTACC GCACGGACGC GAGCCGCCGC
CTCTACGGCT TCGCGCCGGA CGCGATCGCC GCGATGCATC GATACGACTG GCCGGGCAAT
GTGCGGGAGT TGATCAACCG CGTTCGGCGC GCGATCGTGA TGTCGGAGAC TCGCACCATC
ACCGCCGAGG ACCTCGAACT GTCGAGCTAT GTCACGGCCG TGCCCATCAC ACTCGCGCGG
GCGCGCGAAA CCGCCGAACG CCAGGCAATC GAACTCGCAC TTCTACGCCA TCGCGGCCGC
CCCGGCGACG CCGCGCGCGA ACTCAGCATC TCGCGCACCA CGCTTTACCG TCTGCTCACT
TCACATGGCA TGCGATACGG AGACGAACCG GACGCGGCGG AATAG
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| Protein sequence | MQKTKAITRR VIYFTRDPAP GLLASFRERE WDVEVVGSVR EVRQFAQGGS LAGGLVDLSS
VFEPGEAAAL ETCLAMPNIG WVAMAAATHL DDAIPRRLVR DYCFDYVTLP AANERIVDTV
GHACGMISLG EPACLDTSTA EGQMIGTCDA MYALFRAVRK VATTNAPVFI SGESGTGKEL
TAAAIHARSP RRDAPFVAIN CGAIPAQLLQ SELFGYERGA FTGANQRRVG RVEAANGGTL
FLDEIGDLPF ESQASLLRFL QESTISRLGG DGSIDVDVRI ISATHVDMEA AIEDGRFRAD
LYHRLCVLRI DEPPLRARGK DIELLALYTL ERYRTDASRR LYGFAPDAIA AMHRYDWPGN
VRELINRVRR AIVMSETRTI TAEDLELSSY VTAVPITLAR ARETAERQAI ELALLRHRGR
PGDAARELSI SRTTLYRLLT SHGMRYGDEP DAAE
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