| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5338 |
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| Symbol | |
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| ID | 6280418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1519700 |
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| End bp | 1520929 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616424 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001889067 |
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| Protein GI | 187920036 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.18927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGA TTGCCATCAT CGGAGCGGGA TTCATCGGCC TCGCGAGCGC TGTGGCACTG
ATGCGCGACG GCCATCGGGT CACGCTATTC GATCCGGCCG GCGTGGGGCA GGGCGCGTCG
TTCGGCAATG CCGGCACCTT CGCGCACTAT GCGTGCATCC CGGTCAACAA CCCGTCCGTG
TTCCGCGATT TGCCGCGCTT CCTGCTGTCG AATCAAAGCC CGTTCAGATT GCGTTGGGGG
TATCTGCCGC ATCTCACGCC GTGGCTCGTG CGCTTCATGA TGAGTTCGCT GCCGCAGCGC
TATGAAACGA GCGCCGGTGC GCTCGCCGCG CTGCTCGATT GCGCGCAGGA CGGCTACGCG
CCGCTACTCG CCAATGCGGA GTTGGCGCGT TTTGTCCGGC CGCGAGAGTG TCTCTATCTG
TACTCGAACG CGGCTTCGTT CGATGCCGCG CGTCCCGCGC TCGATCTGCG GCACAAGCTG
GGCGTCGCGT TCGAGGTGCT CGACGGCGCC GCCATTCGCG CACTTGAACC GGCGCTGGCG
CCGATCTTCG AGCGCGGCGT GCTGTTCAGC AACAGCTGGC ATTTTTCCGA TCCGCAAGGC
TTTCTGCAGA CGCTGTATGA ACAGCTCGCC GCGCAGGGTC TGAAGCTCGA ACGCTCGACC
GTTGACGCGG TGCAACCCGG CACGGACAGC GCGAGCCTGA CGGTCGGCGG CATGACGCGG
CGTTTCGATC ATGTGGTGGT GGCGACCGGC GCGCGTTCGG CGCAGTTCGC CAGCCAGTGC
GGCGACTCGG TTCCGCTGGA TACGGAACGC GGCTATCACG TGCGCTTTCC CGGCGCGCAG
CAGTTAGTCT CGCGGCCGGT CGGCTGGGCC GAGCGCGGTT TCTACATGAC GCCGATGAGC
GACGGCCTGC GCGTGGCGGG CACGGTCGAA CTCGCCGGTT TCGGCGACAC GCGCAACCGT
TCGCTGCTCG ACCTGCTGAC GTTTTCGTCG AAGCGGGCGT TACCCGCACT CGATACACCG
GATAGCGACT GGCTCGGCTT TCGGCCCACC TTGCCCGACG GCGTGCCGGT GCTGGCGCGC
TCACGCGCGA GCGCACGCGT GATCTACGCA TTCGGTCATC AGCATCTGGG CTTGACGCTG
GCCGGCGTGA GCGGGCGCAT CGTCGCCGAT CTGATCGCAC AGCGTGCGCC GCCGCTCGAT
CTCGCGCCCT ATGCGGCCAC GCGCTTTTGA
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| Protein sequence | MPEIAIIGAG FIGLASAVAL MRDGHRVTLF DPAGVGQGAS FGNAGTFAHY ACIPVNNPSV
FRDLPRFLLS NQSPFRLRWG YLPHLTPWLV RFMMSSLPQR YETSAGALAA LLDCAQDGYA
PLLANAELAR FVRPRECLYL YSNAASFDAA RPALDLRHKL GVAFEVLDGA AIRALEPALA
PIFERGVLFS NSWHFSDPQG FLQTLYEQLA AQGLKLERST VDAVQPGTDS ASLTVGGMTR
RFDHVVVATG ARSAQFASQC GDSVPLDTER GYHVRFPGAQ QLVSRPVGWA ERGFYMTPMS
DGLRVAGTVE LAGFGDTRNR SLLDLLTFSS KRALPALDTP DSDWLGFRPT LPDGVPVLAR
SRASARVIYA FGHQHLGLTL AGVSGRIVAD LIAQRAPPLD LAPYAATRF
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