Gene Bphyt_5330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5330 
Symbol 
ID6279026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1513702 
End bp1514703 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID642616416 
Productaldo/keto reductase 
Protein accessionYP_001889059 
Protein GI187920028 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.685362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTT CGTCGAAAAA CGCTGTGGGG ATTTCGGGCA GGCGCCGTTT TCTGCGCTCG 
GCGGGACACA CTGTGGTCGG CTTGTCGGCG TCGCTCGCAT TGCCTCGGAT GGCGGCGGCT
CAAACGCCAA CGCCAACGCC CAAATCGCAA GCCGCATCCG CCACCACGCC GCTCCCACGC
ATGTCGCAAC GCGTAATTCC CGCCACGGGC GAACGCTTGC CCGTGGTCGG CTGCGGCACC
TGGCGCACCT TCGATGTCGG CGCCGATCCC GCCGGCCGCG CGCAACTCGC CGACGTGCTG
CGTATTCTGT TCGAAGCCGG TGGTTCGGTG ATCGATTCAT CGCCGATGTA CGGCTCGTCG
GAAGCCGTGG CCGGTGCGTT GCTTACGCAA CTGGATGCGC ACGACAAAGC CTTCGTCGCC
ACCAAGGTCT GGACCGAAGG ACGCGAAGCC GGCATCGCGC AGATGGAAGA ATCGCTGCGC
CGCTTTCAGC AGCCGCGCAT CGATCTGATG CAGGTTCACA ACCTGCTCGA CTGGCGCACG
CAACTCGCCA CGCTGCGCGA CTGGAAAGCG CGCGGCCGGA TTCGCTATAT CGGCATCACG
CACTACACGT CGAGTGCGTT CGACGAAGTC GCCGCTGTCA TGCGCAGCGA GAAGCCCGAC
TTCGTGCAGA TCAACTACGC CGCGGACGAC CGCGCCGCCG AAACGCGCAT CTTGCCGCTC
GCGGCGGACT TGGGCATCGG CGTCGTGATC AATCAGCCTT TCGGCGGCGG CGGCTTGCTG
GCACGCGTCG GCAAAACGCC GCTGCCTGAG TGGGCGGCGG AAATCGGCTG CACGAGCTGG
GCGCAGATTC TTCTGAAGTT CGTGCTCGCT CAGCCCGCGG TGACGGTCGT GATTCCCGGC
ACGGGGCGTC CGCAATACAT GGCGGACAAT GTTCGGGCCG GTTCGGGCCC ATTGCCCGAC
GAGGCGATAT GCGCACGAAT CGTGGCGACG GTGAATGGCT AA
 
Protein sequence
MALSSKNAVG ISGRRRFLRS AGHTVVGLSA SLALPRMAAA QTPTPTPKSQ AASATTPLPR 
MSQRVIPATG ERLPVVGCGT WRTFDVGADP AGRAQLADVL RILFEAGGSV IDSSPMYGSS
EAVAGALLTQ LDAHDKAFVA TKVWTEGREA GIAQMEESLR RFQQPRIDLM QVHNLLDWRT
QLATLRDWKA RGRIRYIGIT HYTSSAFDEV AAVMRSEKPD FVQINYAADD RAAETRILPL
AADLGIGVVI NQPFGGGGLL ARVGKTPLPE WAAEIGCTSW AQILLKFVLA QPAVTVVIPG
TGRPQYMADN VRAGSGPLPD EAICARIVAT VNG