| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5329 |
|---|
| Symbol | |
|---|
| ID | 6278902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1510930 |
|---|
| End bp | 1513113 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642616415 |
|---|
| Product | Peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_001889058 |
|---|
| Protein GI | 187920027 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.628963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATAA ATTTCCGATT GCAGATGCAG TGCCTCGCAC TAGCCGGAAT TGCGATTCTG
GCGGGATGCG GCGGCAGCGA CGGCTCGTCT TCCTTGACGA GCAAATCCGC GCAGGCGCCC
GCAGTTGCGT CAGGCGCCTC CGAAGTGGCG CTGGCTCCGC CCGCCGCGCC GGTCGTGGCG
GACACCTCGA TCAACAAGAC GGTGCCGCCG GTCGAGTTGC CCGACACGGT CACGCCGATC
AACTACAAGC TGTGGTTCCG GCCGAACCCC GCGCTGTCTT CATTCGACGG CCGCGCCGAC
GTGCAGATCA AGGTGCAGAA GGCCGTCAAC GCGATCACGA TTGCCGGGCA CCGGGTCAAG
TTCACCAACG GCACGATTAC GCTTCAGCCC GGTAACATCG CGCTGATCGC CACGCCGCAG
GACGACGGCG ACTTCTATCA ACTGCGCCCC GTGAGCGGGC AGATCGCCGC CGGCAACTAC
TCGCTGCATA TGGAGTGGAG CGGCATCATC AACTTCAAGA CCTATGACGA TCCGGTCGCC
AAGACCGGCG GCAGTTGCGG CGACGATCCG TATCCGGGTT GCTCCGCGGC CGAAGGCGTG
TTCCGCGTCG ACCTGAAGTC GACCGACGGC ACGACGAGCG GCGCGATCCT CACGCAGGGC
GAATCGAACC TCGCGCGCCA ATGGTTCCCC GGCTGGGACG AGCCGGCTTT CCGGCCCACC
TACGAGGTGA GCGCGGAGGT GCCACAGAAC TGGAACGTGG TCTCGAACGC GGCGGAGAAA
CCGGCGGTGA ACGTGGATAG CGGCTACAAG CTGGTGTCGT TCGAGAAGAC GCCGCCCATG
CCGTCGTATC TGCTGTTCTT CGGCGGCGGG CAGTTCGACA TTCTCGAAGA CGACTTCACG
AGCCCGTTGC CCGACGGCAA GGGACTGCAT CTGCGGATTT TCACGCCGCC CGGCATGCGT
GACTGGGCCA AACCGGCCAT GCAGCAGACC AAGCAGGCGC TCGATTACTA CTATCGCTAC
ACCGGCATTC CGCTGCCGCT CACCAAGTTC GACACGATCG CGGCCAACGA CGCGTTCAAG
GAGCAGAAGG ACCTGAACTT CGGCGGCATG GAGAACTGGG GCGCCATTCT CGAATTCGCC
GACGACATTC TGCCGGCGCC GGGCACGACC ATGTCCGATT ACGGCGTGAC GGTGCTCACG
CACGAAGCGG CGCACCAATG GTTCGGCGAT CTCGTCACGC TCGACTGGTG GGACGATGTC
TGGCTGAACG AGTCGTTCGC GACGTTCTTC GAGAACAAGA CCAAGGTGCG CTTCTTCCCG
GACCGTTTCA GCTGGGTCGA CGACGTGAAG AACAAGTACG CGGTGATCAA CGCTGACCTG
AAGTCCACGG CGTTCCCGGT GCAGCCGAAT TTCAACGGCT GGGCGTCGAA CGACTTCGTG
CTGAGCGCGA GCGCCTTCAC GTACGACAAA GGCGGTCACG TGCTGAAGAT GCTGGAGAAC
TATCTGGGTG AAGAAACGAT GCGCAAGGGC CTTCAGTCGT ATCTCGCCGA CTATTCGCTC
GGCAACGTTA CGCCCAGGCG TTTGTGGGAC GAACTGTCGA AGGCTAGCGG CCAGCCGATG
GTGGCGATCG GCGACAGCTT CGTGCGGCAA ACAGGCGTGC CGCTGATTTC GCTCGACACG
CAGTGCGATC TGACGACTAA CCAGACGGTG GTCACGCTGA AACAGTCGCC GTTCCCGAAT
CAGAATCAGT ATCCGGGCAC ACAGTGGACC ATCCCGTTGA CACTCGCATA CGGCGACGGC
CTCACTTCGC GCAAGACGTT GGCGATGAAG GACACGCAAA CCCAGGTGCG TCTGAACGGC
TGTTCCGCGG TGCTTGCCGA TCCGAGCGGT CTCGACTACT ACGTGACCAA CTACAGCAAC
AGCGCGTGGA GCCAGTTGCT CGCGCAAGGT AACGCGCTGA AGGATCCGGT TCTGCTGACC
AGTCTGCAAC TCGAAGCGAA GCTGCTGGTG AATAACGGTC TCGCGGATCC GTCGCGCGTC
ACGAGTATCG GCTCGCTGAG CCCGGCGGCC ACACCGCTCG CACGCCAGTT GCTGATGACG
GCGCCGACCA CGCAATCGCA GCGTCCGACG ATCCGCTATC AGGGCAAGTT CAAACTGAAG
CCGCAGGCGC AGCAAGGCCA ATAA
|
|---|
| Protein sequence | MRINFRLQMQ CLALAGIAIL AGCGGSDGSS SLTSKSAQAP AVASGASEVA LAPPAAPVVA
DTSINKTVPP VELPDTVTPI NYKLWFRPNP ALSSFDGRAD VQIKVQKAVN AITIAGHRVK
FTNGTITLQP GNIALIATPQ DDGDFYQLRP VSGQIAAGNY SLHMEWSGII NFKTYDDPVA
KTGGSCGDDP YPGCSAAEGV FRVDLKSTDG TTSGAILTQG ESNLARQWFP GWDEPAFRPT
YEVSAEVPQN WNVVSNAAEK PAVNVDSGYK LVSFEKTPPM PSYLLFFGGG QFDILEDDFT
SPLPDGKGLH LRIFTPPGMR DWAKPAMQQT KQALDYYYRY TGIPLPLTKF DTIAANDAFK
EQKDLNFGGM ENWGAILEFA DDILPAPGTT MSDYGVTVLT HEAAHQWFGD LVTLDWWDDV
WLNESFATFF ENKTKVRFFP DRFSWVDDVK NKYAVINADL KSTAFPVQPN FNGWASNDFV
LSASAFTYDK GGHVLKMLEN YLGEETMRKG LQSYLADYSL GNVTPRRLWD ELSKASGQPM
VAIGDSFVRQ TGVPLISLDT QCDLTTNQTV VTLKQSPFPN QNQYPGTQWT IPLTLAYGDG
LTSRKTLAMK DTQTQVRLNG CSAVLADPSG LDYYVTNYSN SAWSQLLAQG NALKDPVLLT
SLQLEAKLLV NNGLADPSRV TSIGSLSPAA TPLARQLLMT APTTQSQRPT IRYQGKFKLK
PQAQQGQ
|
|---|
| |