Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5325 |
Symbol | |
ID | 6280169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1507671 |
End bp | 1508015 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642616411 |
Product | blue (type 1) copper domain protein |
Protein accession | YP_001889054 |
Protein GI | 187920023 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.261789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCA AAAACATTCG CCGCGTTTTG CTCGCCGTGG CCGCAAGTTC GGCATTGTTC GCGGCATCGT CGGGGTTGTC CGTGGCGCGC GCGCAGACGC CGAACACCGT CACCATCAAG AATTTCATGT TCATGCCGAT GGAGATGACG GTCAAAGCCG GTTCGACCGT GACCTGGAAA AATCTCGACG GCGAACCGCA CACGGTGGTG AACGACTCGG GCATGTTCCG CTCCGCCGCG CTCGATCAGA ACGACACGTA CCAGTTCAAG TTCGACAAGC CAGGCGTGTA CAAGGTGTTC TGCGGCATTC ATCCGAATAT GAAGGAGACC ATCACGGTGC AGTGA
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Protein sequence | MQIKNIRRVL LAVAASSALF AASSGLSVAR AQTPNTVTIK NFMFMPMEMT VKAGSTVTWK NLDGEPHTVV NDSGMFRSAA LDQNDTYQFK FDKPGVYKVF CGIHPNMKET ITVQ
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