| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5323 |
|---|
| Symbol | |
|---|
| ID | 6277595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1505931 |
|---|
| End bp | 1506872 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642616409 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001889052 |
|---|
| Protein GI | 187920021 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCC TGGCGGCAAT CGAAATTTTC ATACGCGTGG TCGACACCGG CTCGTTTTCG
GCCGCCGCGC GCCATTTCGA TGTCGGTCAG CCGGCAGTGT CGAAAGCGAT CGCGCAACTC
GAGGAGTGGC TCGGCGTCAA GCTCCTGCTT CGCACCACGC GCACCCTCAC GCCGACCGAA
GCCGGCACCA GCTTCTACCA GCGCGCCAAA CGCGCGGTGG AGGAAACCGA CGAAGCCGTG
ATGGCCGCGC GCGGCTCGGC GGCCGGCCTC TCGGGCAAAC TGCGGGTCTC GGCGGCGGTG
TGTTTCGCGC GGCTGCATAT CGTGCCGCGT CTGCCGGCGT TTCTCGACGA CCATCCGCAC
CTCGAACTCG AACTCGTGCT CGACGACCGG AATATCGACC TCGTCGAGGA GGGCATCGAC
GTCGCCTTGC GCATGGGCGA GCTCACCGAT TCCAACATGA CCGCGCGCCG CATTGCCGAG
GCGCGCCGCC GCGTGATCGC CACACCGGCT TACTTCAACC GTCACGGCAT TCCCGCGGCG
CCGGCCGATC TGCTCGCGCA CAAGTGCCTC ATCTACACGC GCGACGGCGG CGGCGAAGAC
TGGAAGTTCC GCAAGGAAAC CGCGGAAGTC TCGGTGCGCA TGCAAGGGCG CCTCAGGATC
ACCGCGACCG AAGGCCTGCG CGCGGCCGTC TTCGCCGACA TGGGCGTTGC CGTGGCGTCC
GAATGGGCCT TTACGCCGGA GCTGAAGTCG GGCGCGGTGG TGTCGGTCAT GGACGACTGG
ATGCTGCCCA CCATCAGTCT GTCGGCCGTC TATCCGACCG GACGCCTCGC GAGCACCAAG
GCAAGACAGT TCACCGCCTT CGTGGAAAAC TGCCTCGCCG ACGAAGCGAC TCCTGCTTCA
CGCGCGGCGA ACCAGGCGCT CGAATCCGCG AGGCCAGTCT AG
|
|---|
| Protein sequence | MDRLAAIEIF IRVVDTGSFS AAARHFDVGQ PAVSKAIAQL EEWLGVKLLL RTTRTLTPTE
AGTSFYQRAK RAVEETDEAV MAARGSAAGL SGKLRVSAAV CFARLHIVPR LPAFLDDHPH
LELELVLDDR NIDLVEEGID VALRMGELTD SNMTARRIAE ARRRVIATPA YFNRHGIPAA
PADLLAHKCL IYTRDGGGED WKFRKETAEV SVRMQGRLRI TATEGLRAAV FADMGVAVAS
EWAFTPELKS GAVVSVMDDW MLPTISLSAV YPTGRLASTK ARQFTAFVEN CLADEATPAS
RAANQALESA RPV
|
|---|
| |