| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5319 |
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| Symbol | |
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| ID | 6278075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1501275 |
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| End bp | 1502339 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616405 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001889048 |
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| Protein GI | 187920017 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCCT TCAGACGGGC TCCCGCGCTG CTCGCCGGCG CGTCTTTGCT TTGTCTGCTG
GTCGGTCTTC TTTATCTCGC GTCGCAGATC AGGACCATCT TCTCCGATCA GCTGAAGCAG
GAATACGCCG GACTCGTGCT CGAAGCGGCG GAGCGCGCAG AAAGCGCTCG CGCAATGGTC
GGCGTGTGGC AGCAACAGGC CGGCGACGGT CAGGCGCAGA CGCAGGCTTA TCGCCATGCA
CGCATGGAAC TCGCCGATCG CCTGAAGTCG CTCGCGGCAT TGGTGAATGC CAGTCCGTTG
GCGGCGCCAC GGATGCCGGC GTCGGCGTTG ACGCCCGATG CCAGTCTGAA CGGCATTGAT
GCGCTGCTTG CCACGATCCC GCCGTACTGG CGCGCCCAGC GCGATGCCGA TGGCGCCGAC
GTGCGCCTGC GCATTGCCCA TGTTGCGAAT GTATTGATCG CGCTGGCCGC GCTGCTGTTC
TGCATGTTGC TCACGGCGCT CGGCATGTAC GCAAAACGCA ATCGTCAATT GGCGGGCGAA
TCATATGAGT TCGAGTACGC GGCGCTGCAC GATTCCCTGA CCGGCTTGCC GAACCGGCGC
AACCTGTTCG CCATGCTCGA CGAGGTGGCG GCGAATTTGC ACGCCGCCCC GATGTCTCGC
AAGATCGCCG TGCTGTATGT GGATCTGGAC GGCTTCAAGC AGGTCAACGA CACGCTCGGT
CACCGCGTCG GCGATGAGTT CCTGATTGCG GTGTCGCGTG CTTTTCGCGA GTCGGTGCGC
AAAGTGGATG TCGTCGCGCG CATCGGCGGC GACGAATTCG CGGTGCTGAT TCGAGAGTAT
TCGACGCCGG ATGAATTGGC CGAGATTGCC CAGCGGCTGA TTGCGTGCGT GGTCGAGACC
GACACGGAGA TGGGCATTGG CGTGGTGCGC GCGAGTATCG GTATTGCCAG CTATCCCGAT
CTCGTCAGCG ATTATCAGCG CCTCGTCGCC GCGGCCGACG ACGCGATGTA TCACGTCAAG
CGTGGCGGCA AGAACGGCTA CGCGTTCGCG GCTCAGGCTG ATTGA
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| Protein sequence | MSPFRRAPAL LAGASLLCLL VGLLYLASQI RTIFSDQLKQ EYAGLVLEAA ERAESARAMV
GVWQQQAGDG QAQTQAYRHA RMELADRLKS LAALVNASPL AAPRMPASAL TPDASLNGID
ALLATIPPYW RAQRDADGAD VRLRIAHVAN VLIALAALLF CMLLTALGMY AKRNRQLAGE
SYEFEYAALH DSLTGLPNRR NLFAMLDEVA ANLHAAPMSR KIAVLYVDLD GFKQVNDTLG
HRVGDEFLIA VSRAFRESVR KVDVVARIGG DEFAVLIREY STPDELAEIA QRLIACVVET
DTEMGIGVVR ASIGIASYPD LVSDYQRLVA AADDAMYHVK RGGKNGYAFA AQAD
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