Gene Bphyt_5316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5316 
Symbol 
ID6278877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1499211 
End bp1499873 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID642616402 
ProductGlutathione S-transferase domain 
Protein accessionYP_001889045 
Protein GI187920014 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.591495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCG ATTCCACCTC ATACGTGCTT TACTATTCGC CCGGCGCGGC AAGCATGGCC 
GTGCACTGGA TGCTGATCGA GCTCGGCGTC TCGTTCGAAT CGCAACTGAT TGACATCGAC
GCCGGCCGGC AACACGACCC GGCGTATCTG CGGCTCAACC CCGCGGGGCG CGTGCCCACG
CTGATGGTCG ACGGCACGCC GCGCCACGAG TCGGTGGCGT TGCTGATCCT GCTGGCCGAG
CGGCATCCCG AGGCCGCGCT CGCCCCCGAG CCGGGTTCCG TCGATCGCGC CGCGTGGCTC
GAAATGATGG TCTATCTCGC CAACACGATT CTGCCCGCCA TGCGCGACTG GTTCTACGCG
GGCTCCGACG GCGACCCCGC CGGCGCCGAA GCGGTTCGCG CGCTGGCCTG CCGTCGTCTC
GACGCGGCGT GGGACAAGCT CGATGCACAT CTCGGCGAAA GCCACGACTA TCTGATCGGC
GACAAGCTCA GCACCGCGGA CTTCATGGCC GTCATGTTGA TGCGCTGGAC CCGCAATATG
CCGCGGCCCG CGCTCGGCTG GCCGAATCTT GCCCGCTACA TCCGGCAGCT ACGCGCGCGG
CCTTCGTTCA CCGAATTGAA TGCGCGCGAA GGGCTGACGG AATGGCGCAA CGAAGAAGCG
TGA
 
Protein sequence
MPRDSTSYVL YYSPGAASMA VHWMLIELGV SFESQLIDID AGRQHDPAYL RLNPAGRVPT 
LMVDGTPRHE SVALLILLAE RHPEAALAPE PGSVDRAAWL EMMVYLANTI LPAMRDWFYA
GSDGDPAGAE AVRALACRRL DAAWDKLDAH LGESHDYLIG DKLSTADFMA VMLMRWTRNM
PRPALGWPNL ARYIRQLRAR PSFTELNARE GLTEWRNEEA