Gene Bphyt_5313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5313 
Symbol 
ID6280132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1495203 
End bp1496675 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content63% 
IMG OID642616399 
ProductNa+/solute symporter 
Protein accessionYP_001889042 
Protein GI187920011 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.41213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAC TCGTCATCAT TGCGGCAATC ACGCTGTTTG CGCTTTACCT TGGCGTGCGC 
GCCAAGCGCG GCCACGACAT GAGTCTGGAG CAATGGACCG TGGGCGGCCG CAGCTTCGGC
ACCGCCTTCG TGTTCCTGCT GATGGCTGGT GAAATCTATA CGACCTTCAC CTTCCTCGGC
GGTAGCGGCT TTGCTTATGG CAAGGGCGCG CCCGTCTATT ACATTCTGGC GTACGGCACG
CTCGCGTATA TCCTCTCGTA CTGGATGCTG CCGCCGATCT GGCGTTACGC GAAAAATCAC
CGGCTCGTCT CGCAGCCGCA CTTCTTCACG CGCAAATACG ACAGCCCGGC GCTCGGCACG
CTCGTCGCGC TAGTGGGCGT GGCCGCGTTG ATTCCCTACC TCGTGCTGCA ACTGAAGGGG
CTCGGCATCA TCGTCGCAAC GGCCTCGTAC GGCGCGATTT CGTCGACGGC GGCCGTGTGG
ATCGGCGCCT GTGTGGTGAC GGCCTATGTG ATCGTCTCCG GCGTGCGCGG CTCGGCGTGG
AATTCGGTGG TGAAGGACAT GCTGATTCTC GCGATCGTGC TGTTCCTCGG CATCTATCTG
CCGCTGCACT ACTACGGCGG CTTCGGCGAC ATGTTCCGCG CGATCGATGC CGCGCGCCCT
GGCTTCCTGA CCTTCCCGGC CAAGGGTTCG AGCGTGACGT GGTTCCAGTC GACGGTGCTG
CTGACCGCGC TGGGCTTCTT CATGTGGCCG CATACCTTCG GTTCGATTTT CACGGCTAAG
GACGAACGCA TTTTCCGCCG CAACGCGATG GTGCTGCCGC TCTATCAGCT GATTCTGCTG
TTCGTGTTCT TCGTCGGCTT CGCGGCGACG CTGAAGGTGC CGGGTCTGAA GGGCGGCGAC
ATCGACCTCT CGCTGTTCCG TCTGTCGCTG CAGACCTTCG ACCCGTGGTT CGTCGGCGTG
ATCGGCGCGG CCGGGATTCT GACCGCGCTC GTGCCGGGCT CGATGATCCT CACGTCCGCA
TCAACGCTGC TCGCCAACGA CGTGTATCGC GGCATGGTGA ACCGAAACGC GTCGGACGCC
ACGGTGGCGA AGCTCGCGCG CTTCCTCGTG CCGGTAGTGG CGCTGGTCGC GGTCGGCTTC
ACGCTGCAAG GCGGCGAAAC CATCGTCGCG TTGCTGCTGA TGGGCTACAG CTTCGTGACC
CAGCTCTTTC CGGCGGTGAT CTGCAGCCTG CGTCCGCATA ACCGCGCGAC GAAGCAAGGC
GCGTTTTGCG GGATTCTGGC CGGCGTCGCG GTGGTGGCCG TCACGACCAC GATGCACCTG
AGCATCGGTC AGTTGATGCC GTTCCTGCCC GATGCGCTGA AGGACATCAA TATCGGCTTC
CTCGCGTTGG CGGTGAATAT CATCGTGTTC GCGCTAGTGA GCGCGATGAC GCAGCCGCGG
CCGGTCGAGC AGACGCACGC ACCGGTGCAT TGA
 
Protein sequence
MSALVIIAAI TLFALYLGVR AKRGHDMSLE QWTVGGRSFG TAFVFLLMAG EIYTTFTFLG 
GSGFAYGKGA PVYYILAYGT LAYILSYWML PPIWRYAKNH RLVSQPHFFT RKYDSPALGT
LVALVGVAAL IPYLVLQLKG LGIIVATASY GAISSTAAVW IGACVVTAYV IVSGVRGSAW
NSVVKDMLIL AIVLFLGIYL PLHYYGGFGD MFRAIDAARP GFLTFPAKGS SVTWFQSTVL
LTALGFFMWP HTFGSIFTAK DERIFRRNAM VLPLYQLILL FVFFVGFAAT LKVPGLKGGD
IDLSLFRLSL QTFDPWFVGV IGAAGILTAL VPGSMILTSA STLLANDVYR GMVNRNASDA
TVAKLARFLV PVVALVAVGF TLQGGETIVA LLLMGYSFVT QLFPAVICSL RPHNRATKQG
AFCGILAGVA VVAVTTTMHL SIGQLMPFLP DALKDINIGF LALAVNIIVF ALVSAMTQPR
PVEQTHAPVH