Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5313 |
Symbol | |
ID | 6280132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1495203 |
End bp | 1496675 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642616399 |
Product | Na+/solute symporter |
Protein accession | YP_001889042 |
Protein GI | 187920011 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.41213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAC TCGTCATCAT TGCGGCAATC ACGCTGTTTG CGCTTTACCT TGGCGTGCGC GCCAAGCGCG GCCACGACAT GAGTCTGGAG CAATGGACCG TGGGCGGCCG CAGCTTCGGC ACCGCCTTCG TGTTCCTGCT GATGGCTGGT GAAATCTATA CGACCTTCAC CTTCCTCGGC GGTAGCGGCT TTGCTTATGG CAAGGGCGCG CCCGTCTATT ACATTCTGGC GTACGGCACG CTCGCGTATA TCCTCTCGTA CTGGATGCTG CCGCCGATCT GGCGTTACGC GAAAAATCAC CGGCTCGTCT CGCAGCCGCA CTTCTTCACG CGCAAATACG ACAGCCCGGC GCTCGGCACG CTCGTCGCGC TAGTGGGCGT GGCCGCGTTG ATTCCCTACC TCGTGCTGCA ACTGAAGGGG CTCGGCATCA TCGTCGCAAC GGCCTCGTAC GGCGCGATTT CGTCGACGGC GGCCGTGTGG ATCGGCGCCT GTGTGGTGAC GGCCTATGTG ATCGTCTCCG GCGTGCGCGG CTCGGCGTGG AATTCGGTGG TGAAGGACAT GCTGATTCTC GCGATCGTGC TGTTCCTCGG CATCTATCTG CCGCTGCACT ACTACGGCGG CTTCGGCGAC ATGTTCCGCG CGATCGATGC CGCGCGCCCT GGCTTCCTGA CCTTCCCGGC CAAGGGTTCG AGCGTGACGT GGTTCCAGTC GACGGTGCTG CTGACCGCGC TGGGCTTCTT CATGTGGCCG CATACCTTCG GTTCGATTTT CACGGCTAAG GACGAACGCA TTTTCCGCCG CAACGCGATG GTGCTGCCGC TCTATCAGCT GATTCTGCTG TTCGTGTTCT TCGTCGGCTT CGCGGCGACG CTGAAGGTGC CGGGTCTGAA GGGCGGCGAC ATCGACCTCT CGCTGTTCCG TCTGTCGCTG CAGACCTTCG ACCCGTGGTT CGTCGGCGTG ATCGGCGCGG CCGGGATTCT GACCGCGCTC GTGCCGGGCT CGATGATCCT CACGTCCGCA TCAACGCTGC TCGCCAACGA CGTGTATCGC GGCATGGTGA ACCGAAACGC GTCGGACGCC ACGGTGGCGA AGCTCGCGCG CTTCCTCGTG CCGGTAGTGG CGCTGGTCGC GGTCGGCTTC ACGCTGCAAG GCGGCGAAAC CATCGTCGCG TTGCTGCTGA TGGGCTACAG CTTCGTGACC CAGCTCTTTC CGGCGGTGAT CTGCAGCCTG CGTCCGCATA ACCGCGCGAC GAAGCAAGGC GCGTTTTGCG GGATTCTGGC CGGCGTCGCG GTGGTGGCCG TCACGACCAC GATGCACCTG AGCATCGGTC AGTTGATGCC GTTCCTGCCC GATGCGCTGA AGGACATCAA TATCGGCTTC CTCGCGTTGG CGGTGAATAT CATCGTGTTC GCGCTAGTGA GCGCGATGAC GCAGCCGCGG CCGGTCGAGC AGACGCACGC ACCGGTGCAT TGA
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Protein sequence | MSALVIIAAI TLFALYLGVR AKRGHDMSLE QWTVGGRSFG TAFVFLLMAG EIYTTFTFLG GSGFAYGKGA PVYYILAYGT LAYILSYWML PPIWRYAKNH RLVSQPHFFT RKYDSPALGT LVALVGVAAL IPYLVLQLKG LGIIVATASY GAISSTAAVW IGACVVTAYV IVSGVRGSAW NSVVKDMLIL AIVLFLGIYL PLHYYGGFGD MFRAIDAARP GFLTFPAKGS SVTWFQSTVL LTALGFFMWP HTFGSIFTAK DERIFRRNAM VLPLYQLILL FVFFVGFAAT LKVPGLKGGD IDLSLFRLSL QTFDPWFVGV IGAAGILTAL VPGSMILTSA STLLANDVYR GMVNRNASDA TVAKLARFLV PVVALVAVGF TLQGGETIVA LLLMGYSFVT QLFPAVICSL RPHNRATKQG AFCGILAGVA VVAVTTTMHL SIGQLMPFLP DALKDINIGF LALAVNIIVF ALVSAMTQPR PVEQTHAPVH
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