| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5309 |
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| Symbol | |
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| ID | 6278656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 1491243 |
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| End bp | 1492991 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642616395 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001889038 |
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| Protein GI | 187920007 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCAA CCCGCGACAC CCGCGGCTTC GCATTCGAAT CCACGCTCGG CAAGGTCGCC
CGTGTACTAA CCGGGCAATA CGGCGTGACG GTCGTGTTCA GTCCGGACGG TCCGCGCGTG
GAGCCGGGCC GTATTGTGAT TCCCGACTAC GAGTTGAATG GCGAGGTCGA GCGCGACGTT
CTGATCGGCT ATCTGGATCT GCTGGTCGCG CGCGCCAAGC ATGCGTCGCT CGCGCAACTC
GACGCGCTGC CGGCGGGCGT CGCCGCGAAA CTCGCGCAGG TGATCGACGA CCGCCGCGTG
TGTGCGCAGT TGCTCGACGA ATATCCGGGC GCGCGCTGGT TCATTGGCAA GCTGCGCCAG
CATGCGGCCG AGCGCGTGCA GCAGTGCTGG CCGAAGCTGC ACTGGCGCGA CCGGCTGGTC
TGGCTGGTCG AGCGCGCGTT GTGGGACGAA CCGCCCACCC GGCTCGAAGC GAGCCATTCG
TTGCTCGCCG CATTGCACGC CGCGCAGGAT CTGCTGCACG AGGCGCGCGC GAGCCGCTCC
ACCACGCAGA GCATTGCGGC GGCGCAGGCG CTGGTGGCGC GCGTGCGCGC GCTGTCGGCG
GGTGAGGTGA ACAGCATGAT GTTCACCGCG GACCCGGTCG AGGACATCGA TACGGAAACG
GCGGCTTCAT CGTCCGCGCC AATCGACGAT GAAGACACGG TGCTGCCCGA TCAGGACAGC
GCAAACTCCC CGCCGTCCGA TCGAAGCGGT GGCGCGCAGG CGGACGACGC GGTCGGCATG
GGTCAATCGC CGGCGGACGC GCAGCAGCCG TCCACGCGTT CCTCAGAAAG TAAAGCCGGC
AGCGCGAATA CGCATGCGTT CAAAGCCACA CTGTCGATCC CGCTCGCCAC TGAATTCGAC
GACATCCGCG ATCTCACGGG CCAGGGCGAC AGCGCCGCAT GGCGCGAGCT GCGCGCGCAG
GCTCGCGCGG ACACGGCGCC GCTCAAGGAA AAGCTCGAAC GCGCGCTGAG CGCCGACGAA
CGCACACGCT GGCGCCGCGA GCAGGAGCGC GGCGAGATCG ATCGCACCGC GCTGGCGAAG
CTCGCAACCT CGCCCGGTTA CCGCACGCCG TTTCGCACGC AGCGGGCCGC TAAAGGACGC
GATGTCGCCG TGACGCTGCT GATCGACCGC AGCGGCTCGA TGGCGGGCCG CAAGATCGAA
CTCGCGCGCC AGTGCGCGGC CGCCTTGTGC GATGCGCTCA CGCAGTTGTC GTTCGATTGC
GAAGTGCTCG GTTATTGCTC GGTCGAATCC GCGCCCATGA AGCAGCTCTA CGAGCGGCAA
CTCGCCGGCG GCGCGGATCT GCGGCGCTAC AACCGCTTCG TCGAACGGCT CGACCTGAAG
GTTTATAAGC GCTTTGGCGC GACGGACCTG AGCGGGATCG CCGCGATCGA CTGCGGTCAT
GAGAATCCGG ACGGCGAGGC GCTTGCCTGG GCCGCGACGC GCCTCGCCGA CCATCAGGCC
GAACGGCGCA TTCTAATGAT GTTCTCCGAC GGTTATCCCT CCACCGGCGA CGGCGACCCG
CAGGTATTGC GCAGCGATCT GCGCGAGCGC GTCGCGGCCA TCGGCAAGCG CGGCATCGAG
CTGGTGGGAA TCGGCGTGCT GACCGACGCG GTTGAAGACT TCTATCCGCA CAACGTGGTG
GTCAGCCGCC TTGCCGAATT GCCATCCACC GTGTTCTCCG TGTTGAGCGC GATGCTGCTC
ACGCGTTGA
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| Protein sequence | MHATRDTRGF AFESTLGKVA RVLTGQYGVT VVFSPDGPRV EPGRIVIPDY ELNGEVERDV
LIGYLDLLVA RAKHASLAQL DALPAGVAAK LAQVIDDRRV CAQLLDEYPG ARWFIGKLRQ
HAAERVQQCW PKLHWRDRLV WLVERALWDE PPTRLEASHS LLAALHAAQD LLHEARASRS
TTQSIAAAQA LVARVRALSA GEVNSMMFTA DPVEDIDTET AASSSAPIDD EDTVLPDQDS
ANSPPSDRSG GAQADDAVGM GQSPADAQQP STRSSESKAG SANTHAFKAT LSIPLATEFD
DIRDLTGQGD SAAWRELRAQ ARADTAPLKE KLERALSADE RTRWRREQER GEIDRTALAK
LATSPGYRTP FRTQRAAKGR DVAVTLLIDR SGSMAGRKIE LARQCAAALC DALTQLSFDC
EVLGYCSVES APMKQLYERQ LAGGADLRRY NRFVERLDLK VYKRFGATDL SGIAAIDCGH
ENPDGEALAW AATRLADHQA ERRILMMFSD GYPSTGDGDP QVLRSDLRER VAAIGKRGIE
LVGIGVLTDA VEDFYPHNVV VSRLAELPST VFSVLSAMLL TR
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